Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Traf1P39428 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Traf1P39428 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Traf1P39428 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Traf1P39428 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Traf1P39428 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Traf1P39428 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Traf1P39428 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Gm23747-201ENSMUST00000104228 131 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Gm14751-201ENSMUST00000117693 222 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Gm26477-201ENSMUST00000122617 323 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Gm25807-201ENSMUST00000122783 305 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Gm23668-201ENSMUST00000157465 111 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Gm26088-201ENSMUST00000157896 131 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Gm26215-201ENSMUST00000158584 139 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Traf1P39428 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Mir6338-201ENSMUST00000183389 109 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Mir7k-201ENSMUST00000184115 110 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Gm28113-201ENSMUST00000188280 229 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Traf1P39428 Gm43026-201ENSMUST00000202972 325 ntBASIC3.57□□□□□ -1.84
Traf1P39428 AC115047.1-201ENSMUST00000213795 322 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Traf1P39428 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.57□□□□□ -1.84
Traf1P39428 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC3.57□□□□□ -1.84
Traf1P39428 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Traf1P39428 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Traf1P39428 Gm23516-201ENSMUST00000093728 107 ntBASIC3.57□□□□□ -1.84
Traf1P39428 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Traf1P39428 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Traf1P39428 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Traf1P39428 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Traf1P39428 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
Traf1P39428 Gm14007-201ENSMUST00000118288 210 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Gm25373-201ENSMUST00000158156 115 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Gm24552-201ENSMUST00000158646 103 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Gm21894-201ENSMUST00000179631 546 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Traf1P39428 Gm7858-201ENSMUST00000190177 622 ntBASIC3.56□□□□□ -1.84
Traf1P39428 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Traf1P39428 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Gm45438-201ENSMUST00000210242 564 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Traf1P39428 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Traf1P39428 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.56□□□□□ -1.84
Traf1P39428 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Traf1P39428 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Traf1P39428 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Traf1P39428 Gm11582-201ENSMUST00000121041 236 ntBASIC3.55□□□□□ -1.84
Traf1P39428 Gm2020-201ENSMUST00000145242 579 ntBASIC3.55□□□□□ -1.84
Traf1P39428 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.55□□□□□ -1.84
Traf1P39428 Gm20651-201ENSMUST00000177219 329 ntBASIC3.55□□□□□ -1.84
Traf1P39428 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Traf1P39428 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.55□□□□□ -1.84
Traf1P39428 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.55□□□□□ -1.84
Traf1P39428 Gm44718-201ENSMUST00000206886 359 ntBASIC3.55□□□□□ -1.84
Traf1P39428 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.55□□□□□ -1.84
Traf1P39428 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.55□□□□□ -1.84
Traf1P39428 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Traf1P39428 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Traf1P39428 Gm32300-201ENSMUST00000221735 515 ntBASIC3.55□□□□□ -1.84
Traf1P39428 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.55□□□□□ -1.84
Traf1P39428 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Traf1P39428 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Traf1P39428 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Traf1P39428 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Traf1P39428 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Traf1P39428 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Traf1P39428 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Traf1P39428 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Traf1P39428 Mir878-201ENSMUST00000104680 78 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Gm11598-201ENSMUST00000119257 357 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Gm7071-201ENSMUST00000120458 462 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Gm12723-201ENSMUST00000120700 451 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Gm12819-201ENSMUST00000122223 629 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC3.54□□□□□ -1.84
Traf1P39428 Gm26061-201ENSMUST00000175584 108 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
Traf1P39428 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Traf1P39428 Gm27921-201ENSMUST00000183968 108 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.54□□□□□ -1.84
Traf1P39428 Gm29658-201ENSMUST00000185404 230 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Gm29192-201ENSMUST00000190942 377 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Gm19147-201ENSMUST00000199622 652 ntBASIC3.54□□□□□ -1.84
Traf1P39428 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.54□□□□□ -1.84
Traf1P39428 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.54□□□□□ -1.84
Traf1P39428 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Traf1P39428 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.54□□□□□ -1.84
Traf1P39428 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.54□□□□□ -1.84
Traf1P39428 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms