Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Gm28860-201ENSMUST00000188103 313 ntBASIC4.25□□□□□ -1.73
Lig1P37913 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.25□□□□□ -1.73
Lig1P37913 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.25□□□□□ -1.73
Lig1P37913 Gm9722-201ENSMUST00000194568 802 ntBASIC4.25□□□□□ -1.73
Lig1P37913 Gm44720-201ENSMUST00000206076 260 ntBASIC4.25□□□□□ -1.73
Lig1P37913 Gm44609-201ENSMUST00000207157 460 ntBASIC4.25□□□□□ -1.73
Lig1P37913 Gm45312-201ENSMUST00000210566 311 ntBASIC4.25□□□□□ -1.73
Lig1P37913 Gm45735-201ENSMUST00000212779 319 ntBASIC4.25□□□□□ -1.73
Lig1P37913 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Lig1P37913 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.25□□□□□ -1.73
Lig1P37913 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Lig1P37913 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Lig1P37913 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.25□□□□□ -1.73
Lig1P37913 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Lig1P37913 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.25□□□□□ -1.73
Lig1P37913 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.25□□□□□ -1.73
Lig1P37913 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Lig1P37913 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Lig1P37913 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lig1P37913 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lig1P37913 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lig1P37913 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Lig1P37913 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lig1P37913 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Lig1P37913 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm15377-201ENSMUST00000119594 246 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm16362-201ENSMUST00000135189 214 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm16327-201ENSMUST00000137146 228 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.24□□□□□ -1.73
Lig1P37913 Gm23326-201ENSMUST00000157419 105 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm23078-201ENSMUST00000157848 148 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm24730-201ENSMUST00000158228 117 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm17183-201ENSMUST00000171170 493 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm21171-201ENSMUST00000180048 673 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
Lig1P37913 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Lig1P37913 Gm28016-201ENSMUST00000184594 196 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm28781-201ENSMUST00000185760 696 ntBASIC4.24□□□□□ -1.73
Lig1P37913 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Lig1P37913 Gm29307-201ENSMUST00000187367 696 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm29339-201ENSMUST00000189613 696 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm29407-201ENSMUST00000191468 696 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm38332-201ENSMUST00000194189 147 ntBASIC4.24□□□□□ -1.73
Lig1P37913 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Lig1P37913 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.24□□□□□ -1.73
Lig1P37913 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.24□□□□□ -1.73
Lig1P37913 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lig1P37913 Gm23404-201ENSMUST00000082543 97 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm25792-201ENSMUST00000083289 100 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm23848-201ENSMUST00000083826 106 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Gm22365-201ENSMUST00000093750 117 ntBASIC4.24□□□□□ -1.73
Lig1P37913 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Lig1P37913 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lig1P37913 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Lig1P37913 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Lig1P37913 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.24□□□□□ -1.73
Lig1P37913 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Lig1P37913 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lig1P37913 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Lig1P37913 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lig1P37913 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lig1P37913 Gm13082-201ENSMUST00000118877 561 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm12294-201ENSMUST00000119723 490 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm16005-201ENSMUST00000120515 269 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm12578-201ENSMUST00000121244 417 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm14736-201ENSMUST00000121470 336 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm5123-201ENSMUST00000121905 837 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm5755-201ENSMUST00000152394 837 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm23168-201ENSMUST00000157156 143 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm24244-201ENSMUST00000157317 130 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm23755-201ENSMUST00000157578 343 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm22136-201ENSMUST00000158751 268 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.23□□□□□ -1.73
Lig1P37913 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm27580-201ENSMUST00000183666 149 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm27733-201ENSMUST00000184803 68 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Lig1P37913 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.23□□□□□ -1.73
Lig1P37913 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.23□□□□□ -1.73
Lig1P37913 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Lig1P37913 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.23□□□□□ -1.73
Lig1P37913 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm43083-201ENSMUST00000199594 476 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm45614-201ENSMUST00000209994 721 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm45438-201ENSMUST00000210242 564 ntBASIC4.23□□□□□ -1.73
Lig1P37913 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.23□□□□□ -1.73
Lig1P37913 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.23□□□□□ -1.73
Lig1P37913 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm26228-201ENSMUST00000082512 107 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm25080-201ENSMUST00000082526 107 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Gm25518-201ENSMUST00000083864 107 ntBASIC4.23□□□□□ -1.73
Lig1P37913 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lig1P37913 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lig1P37913 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Lig1P37913 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lig1P37913 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.22□□□□□ -1.73
Lig1P37913 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms