Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
RxraP28700 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RxraP28700 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RxraP28700 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RxraP28700 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RxraP28700 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
RxraP28700 Gm13728-201ENSMUST00000117471 400 ntBASIC3.62□□□□□ -1.83
RxraP28700 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm15443-201ENSMUST00000118947 820 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm11359-201ENSMUST00000120039 567 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm14656-201ENSMUST00000120342 502 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm6079-201ENSMUST00000121356 404 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm9225-201ENSMUST00000121921 836 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm15077-201ENSMUST00000122344 362 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm12238-201ENSMUST00000127764 124 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.62□□□□□ -1.83
RxraP28700 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC3.62□□□□□ -1.83
RxraP28700 Snord92-201ENSMUST00000175548 85 ntBASIC3.62□□□□□ -1.83
RxraP28700 Mir6338-201ENSMUST00000183389 109 ntBASIC3.62□□□□□ -1.83
RxraP28700 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm27313-201ENSMUST00000183500 142 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm27189-201ENSMUST00000184119 190 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm27445-201ENSMUST00000184484 72 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm28927-201ENSMUST00000191528 272 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.62□□□□□ -1.83
RxraP28700 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.62□□□□□ -1.83
RxraP28700 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.62□□□□□ -1.83
RxraP28700 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.62□□□□□ -1.83
RxraP28700 AC116589.4-201ENSMUST00000222390 216 ntBASIC3.62□□□□□ -1.83
RxraP28700 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm26228-201ENSMUST00000082512 107 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm25080-201ENSMUST00000082526 107 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm25205-201ENSMUST00000082841 103 ntBASIC3.62□□□□□ -1.83
RxraP28700 Gm25518-201ENSMUST00000083864 107 ntBASIC3.62□□□□□ -1.83
RxraP28700 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RxraP28700 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
RxraP28700 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RxraP28700 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RxraP28700 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RxraP28700 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RxraP28700 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RxraP28700 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RxraP28700 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RxraP28700 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.61□□□□□ -1.83
RxraP28700 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.61□□□□□ -1.83
RxraP28700 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RxraP28700 Gm22755-201ENSMUST00000157143 100 ntBASIC3.61□□□□□ -1.83
RxraP28700 Gm23257-201ENSMUST00000158322 132 ntBASIC3.61□□□□□ -1.83
RxraP28700 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.61□□□□□ -1.83
RxraP28700 Gm20399-201ENSMUST00000174652 132 ntBASIC3.61□□□□□ -1.83
RxraP28700 Gm20698-201ENSMUST00000175657 233 ntBASIC3.61□□□□□ -1.83
RxraP28700 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.61□□□□□ -1.83
RxraP28700 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.61□□□□□ -1.83
RxraP28700 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.61□□□□□ -1.83
RxraP28700 Gm37239-201ENSMUST00000193510 141 ntBASIC3.61□□□□□ -1.83
RxraP28700 Gm45539-201ENSMUST00000210313 428 ntBASIC3.61□□□□□ -1.83
RxraP28700 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.61□□□□□ -1.83
RxraP28700 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.61□□□□□ -1.83
RxraP28700 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RxraP28700 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RxraP28700 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
RxraP28700 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RxraP28700 Gm15760-201ENSMUST00000119553 283 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm11522-201ENSMUST00000120533 176 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm11384-201ENSMUST00000121376 303 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm22957-201ENSMUST00000122511 123 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm26276-201ENSMUST00000157099 109 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm25559-201ENSMUST00000157182 74 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm26101-201ENSMUST00000157246 105 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm24745-201ENSMUST00000157840 85 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm16569-201ENSMUST00000160526 314 ntBASIC3.6□□□□□ -1.83
RxraP28700 Mir5710-201ENSMUST00000176884 69 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm22367-201ENSMUST00000178930 132 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm22631-201ENSMUST00000179656 94 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm27539-201ENSMUST00000184971 224 ntBASIC3.6□□□□□ -1.83
RxraP28700 Trbv8-201ENSMUST00000194020 285 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm44011-201ENSMUST00000203336 394 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.6□□□□□ -1.83
RxraP28700 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RxraP28700 Gm44657-201ENSMUST00000208568 450 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm45588-201ENSMUST00000211213 630 ntBASIC3.6□□□□□ -1.83
RxraP28700 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.6□□□□□ -1.83
RxraP28700 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RxraP28700 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RxraP28700 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RxraP28700 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RxraP28700 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.6□□□□□ -1.83
RxraP28700 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.6□□□□□ -1.83
RxraP28700 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RxraP28700 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RxraP28700 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RxraP28700 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RxraP28700 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RxraP28700 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.59□□□□□ -1.83
RxraP28700 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RxraP28700 Gm14570-201ENSMUST00000119444 391 ntBASIC3.59□□□□□ -1.83
RxraP28700 Gm11704-201ENSMUST00000120031 214 ntBASIC3.59□□□□□ -1.83
RxraP28700 Gm11785-201ENSMUST00000120165 601 ntBASIC3.59□□□□□ -1.83
RxraP28700 Gm16005-201ENSMUST00000120515 269 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms