Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm8840-201ENSMUST00000122454 386 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm15733-201ENSMUST00000132957 242 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm9498-201ENSMUST00000140849 291 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Msh3P13705 Gm23022-201ENSMUST00000158768 180 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm25365-201ENSMUST00000158852 121 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm23379-201ENSMUST00000180026 107 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm28597-201ENSMUST00000187664 666 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.36□□□□□ -1.87
Msh3P13705 Trbv22-201ENSMUST00000191697 291 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm45023-201ENSMUST00000207951 379 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm45513-201ENSMUST00000210228 376 ntBASIC3.36□□□□□ -1.87
Msh3P13705 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Msh3P13705 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Msh3P13705 CT010505.1-201ENSMUST00000227026 396 ntBASIC3.36□□□□□ -1.87
Msh3P13705 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Msh3P13705 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Msh3P13705 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Msh3P13705 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Msh3P13705 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msh3P13705 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Msh3P13705 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.36□□□□□ -1.87
Msh3P13705 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Msh3P13705 Gm24096-201ENSMUST00000103905 110 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm14981-201ENSMUST00000117325 943 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm12723-201ENSMUST00000120700 451 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm7308-201ENSMUST00000121087 447 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm14564-201ENSMUST00000122159 294 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.35□□□□□ -1.87
Msh3P13705 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.35□□□□□ -1.87
Msh3P13705 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.35□□□□□ -1.87
Msh3P13705 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.35□□□□□ -1.87
Msh3P13705 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.35□□□□□ -1.87
Msh3P13705 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Msh3P13705 Mir6408-201ENSMUST00000183643 91 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm18185-201ENSMUST00000186725 667 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.35□□□□□ -1.87
Msh3P13705 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.35□□□□□ -1.87
Msh3P13705 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.35□□□□□ -1.87
Msh3P13705 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Msh3P13705 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Msh3P13705 Gm43746-201ENSMUST00000200028 317 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC3.35□□□□□ -1.87
Msh3P13705 Gm19649-201ENSMUST00000201126 822 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.35□□□□□ -1.87
Msh3P13705 Gm18703-201ENSMUST00000215318 333 ntBASIC3.35□□□□□ -1.87
Msh3P13705 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm2628-201ENSMUST00000218019 426 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gm20304-201ENSMUST00000218168 444 ntBASIC3.35□□□□□ -1.87
Msh3P13705 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.35□□□□□ -1.87
Msh3P13705 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Mir19a-201ENSMUST00000083482 82 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Msh3P13705 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.35□□□□□ -1.87
Msh3P13705 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Msh3P13705 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Msh3P13705 Gm22115-201ENSMUST00000103976 133 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm23923-201ENSMUST00000104108 133 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm22771-201ENSMUST00000104449 91 ntBASIC3.34□□□□□ -1.87
Msh3P13705 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Msh3P13705 Gm13803-201ENSMUST00000117547 489 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm14292-201ENSMUST00000118761 456 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm11693-201ENSMUST00000119625 565 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm14785-201ENSMUST00000120185 539 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm14240-201ENSMUST00000120353 546 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.34□□□□□ -1.87
Msh3P13705 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Msh3P13705 Gm23168-201ENSMUST00000157156 143 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.34□□□□□ -1.87
Msh3P13705 Gm7909-201ENSMUST00000182688 614 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Mir6382-201ENSMUST00000184055 110 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm27163-201ENSMUST00000184767 409 ntBASIC3.34□□□□□ -1.87
Msh3P13705 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Msh3P13705 Gm36984-201ENSMUST00000192770 235 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm37732-201ENSMUST00000194377 316 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm37431-201ENSMUST00000195102 111 ntBASIC3.34□□□□□ -1.87
Msh3P13705 Gm18384-201ENSMUST00000195974 808 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms