Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RaraP11416 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.89□□□□□ -1.63
RaraP11416 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RaraP11416 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RaraP11416 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RaraP11416 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RaraP11416 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.88□□□□□ -1.63
RaraP11416 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RaraP11416 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RaraP11416 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.88□□□□□ -1.63
RaraP11416 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RaraP11416 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
RaraP11416 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RaraP11416 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RaraP11416 Gm23705-201ENSMUST00000104370 130 ntBASIC4.88□□□□□ -1.63
RaraP11416 Mir105-201ENSMUST00000104655 80 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm11367-201ENSMUST00000117802 120 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm14877-201ENSMUST00000119803 478 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm12237-201ENSMUST00000120158 470 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm12721-201ENSMUST00000120621 268 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm13692-201ENSMUST00000120774 371 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm24188-201ENSMUST00000157980 108 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RaraP11416 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
RaraP11416 Gm29596-201ENSMUST00000185710 385 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm29097-201ENSMUST00000190273 422 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm20203-201ENSMUST00000192352 332 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm44474-201ENSMUST00000196525 127 ntBASIC4.88□□□□□ -1.63
RaraP11416 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm44389-201ENSMUST00000203795 182 ntBASIC4.88□□□□□ -1.63
RaraP11416 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
RaraP11416 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.88□□□□□ -1.63
RaraP11416 Gm25147-201ENSMUST00000083030 105 ntBASIC4.88□□□□□ -1.63
RaraP11416 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.88□□□□□ -1.63
RaraP11416 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RaraP11416 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RaraP11416 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RaraP11416 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RaraP11416 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RaraP11416 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RaraP11416 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.87□□□□□ -1.63
RaraP11416 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RaraP11416 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.87□□□□□ -1.63
RaraP11416 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.87□□□□□ -1.63
RaraP11416 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RaraP11416 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.87□□□□□ -1.63
RaraP11416 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RaraP11416 Gm23948-201ENSMUST00000104030 132 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm22498-201ENSMUST00000104497 86 ntBASIC4.87□□□□□ -1.63
RaraP11416 Mir1193-201ENSMUST00000116761 121 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm11448-201ENSMUST00000120427 450 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm14581-201ENSMUST00000121726 198 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm10059-201ENSMUST00000131139 171 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm24251-201ENSMUST00000157324 114 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm25383-201ENSMUST00000157810 144 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm23892-201ENSMUST00000158105 130 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm27510-201ENSMUST00000158214 64 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm22859-201ENSMUST00000174978 122 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm5372-201ENSMUST00000187540 409 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm28830-201ENSMUST00000188192 213 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm32308-201ENSMUST00000203053 280 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm17766-201ENSMUST00000209223 442 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm2059-201ENSMUST00000212025 287 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm46138-201ENSMUST00000215294 426 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.87□□□□□ -1.63
RaraP11416 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.87□□□□□ -1.63
RaraP11416 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RaraP11416 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RaraP11416 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RaraP11416 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RaraP11416 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.87□□□□□ -1.63
RaraP11416 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RaraP11416 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.87□□□□□ -1.63
RaraP11416 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.86□□□□□ -1.63
RaraP11416 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RaraP11416 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RaraP11416 Gm7853-201ENSMUST00000100708 478 ntBASIC4.86□□□□□ -1.63
RaraP11416 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
RaraP11416 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RaraP11416 Gm15752-201ENSMUST00000117427 394 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm15058-201ENSMUST00000117689 458 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm14559-201ENSMUST00000121745 496 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm13424-201ENSMUST00000122301 354 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm24630-201ENSMUST00000122768 106 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
RaraP11416 Gm26412-201ENSMUST00000157666 55 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm24507-201ENSMUST00000157683 134 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm22328-201ENSMUST00000158074 112 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm22381-201ENSMUST00000158186 107 ntBASIC4.86□□□□□ -1.63
RaraP11416 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.86□□□□□ -1.63
RaraP11416 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RaraP11416 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm44473-201ENSMUST00000204039 152 ntBASIC4.86□□□□□ -1.63
RaraP11416 Gm44881-201ENSMUST00000205425 367 ntBASIC4.86□□□□□ -1.63
RaraP11416 AC164297.3-201ENSMUST00000224238 94 ntBASIC4.86□□□□□ -1.63
RaraP11416 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.86□□□□□ -1.63
RaraP11416 Mir202-201ENSMUST00000083568 72 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms