Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm25155-201ENSMUST00000178450 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm24760-201ENSMUST00000178530 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm22285-201ENSMUST00000178576 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm22417-201ENSMUST00000178656 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm26270-201ENSMUST00000178690 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm23313-201ENSMUST00000178931 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm23089-201ENSMUST00000178947 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm24153-201ENSMUST00000179280 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm25597-201ENSMUST00000179388 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm25816-201ENSMUST00000179764 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm26189-201ENSMUST00000179879 107 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm26188-201ENSMUST00000179963 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm26433-201ENSMUST00000180227 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm22128-201ENSMUST00000180346 94 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm28412-201ENSMUST00000187243 177 ntBASIC3.14□□□□□ -1.91
Lire1P11260 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.14□□□□□ -1.91
Lire1P11260 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Lire1P11260 Gm5268-201ENSMUST00000189212 940 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.14□□□□□ -1.91
Lire1P11260 Gm42621-201ENSMUST00000198114 275 ntBASIC3.14□□□□□ -1.91
Lire1P11260 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.14□□□□□ -1.91
Lire1P11260 Gm43026-201ENSMUST00000202972 325 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.14□□□□□ -1.91
Lire1P11260 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Lire1P11260 Gm18557-201ENSMUST00000218710 433 ntBASIC3.14□□□□□ -1.91
Lire1P11260 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.14□□□□□ -1.91
Lire1P11260 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.14□□□□□ -1.91
Lire1P11260 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.14□□□□□ -1.91
Lire1P11260 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.14□□□□□ -1.91
Lire1P11260 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Lire1P11260 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Lire1P11260 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.14□□□□□ -1.91
Lire1P11260 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.14□□□□□ -1.91
Lire1P11260 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Lire1P11260 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.13□□□□□ -1.91
Lire1P11260 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm12412-201ENSMUST00000121867 328 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm15089-201ENSMUST00000122332 1196 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm23791-201ENSMUST00000122553 293 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm25270-201ENSMUST00000122606 138 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm24627-201ENSMUST00000122764 138 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm2830-201ENSMUST00000140330 385 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm23476-201ENSMUST00000158881 274 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm4540-201ENSMUST00000170669 429 ntBASIC3.13□□□□□ -1.91
Lire1P11260 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Lire1P11260 Gm27676-201ENSMUST00000183669 61 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Mir8103-201ENSMUST00000183945 107 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.13□□□□□ -1.91
Lire1P11260 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.13□□□□□ -1.91
Lire1P11260 Gm38213-201ENSMUST00000193203 173 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm29747-201ENSMUST00000194764 585 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Lire1P11260 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm44016-201ENSMUST00000203463 164 ntBASIC3.13□□□□□ -1.91
Lire1P11260 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Lire1P11260 Gm44555-201ENSMUST00000209008 148 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.13□□□□□ -1.91
Lire1P11260 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.13□□□□□ -1.91
Lire1P11260 Gm46136-201ENSMUST00000214730 565 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Lire1P11260 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.13□□□□□ -1.91
Lire1P11260 Gm19326-201ENSMUST00000219818 326 ntBASIC3.13□□□□□ -1.91
Lire1P11260 AC160962.2-201ENSMUST00000224761 632 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm6369-201ENSMUST00000069626 412 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm25411-201ENSMUST00000083760 151 ntBASIC3.13□□□□□ -1.91
Lire1P11260 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Lire1P11260 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.13□□□□□ -1.91
Lire1P11260 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Lire1P11260 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Lire1P11260 Mir673-201ENSMUST00000102361 91 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm22270-201ENSMUST00000104034 132 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm24280-201ENSMUST00000104237 134 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm12513-201ENSMUST00000118617 352 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.12□□□□□ -1.91
Lire1P11260 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.12□□□□□ -1.91
Lire1P11260 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Lire1P11260 Gm24138-201ENSMUST00000157572 114 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm23032-201ENSMUST00000157995 107 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Lire1P11260 Gm21726-201ENSMUST00000179654 392 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm3454-201ENSMUST00000185571 412 ntBASIC3.12□□□□□ -1.91
Lire1P11260 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms