Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm22020-201ENSMUST00000104358 136 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm23709-201ENSMUST00000104364 130 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm23705-201ENSMUST00000104370 130 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm14469-201ENSMUST00000118363 202 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm5384-201ENSMUST00000120313 463 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm12956-201ENSMUST00000122184 414 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm24997-201ENSMUST00000157910 105 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm26028-201ENSMUST00000158660 294 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm6374-201ENSMUST00000159051 788 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm23725-201ENSMUST00000177876 107 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm27851-201ENSMUST00000183529 63 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Mir6336-201ENSMUST00000183581 130 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm27997-201ENSMUST00000184942 69 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm28920-201ENSMUST00000189957 699 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm17954-201ENSMUST00000195893 607 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm42623-201ENSMUST00000197225 379 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm45327-201ENSMUST00000211612 565 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.91□□□□□ -1.78
Hoxd4P10628 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm26497-201ENSMUST00000083146 107 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.91□□□□□ -1.78
Hoxd4P10628 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd4P10628 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd4P10628 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hoxd4P10628 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Hoxd4P10628 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Hoxd4P10628 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hoxd4P10628 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hoxd4P10628 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hoxd4P10628 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Hoxd4P10628 Gm23948-201ENSMUST00000104030 132 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm25096-201ENSMUST00000104043 129 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm15951-201ENSMUST00000118377 400 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm12328-201ENSMUST00000118611 197 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm14566-201ENSMUST00000118915 321 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm13737-201ENSMUST00000119793 232 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm12854-201ENSMUST00000128518 297 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm25150-201ENSMUST00000157121 60 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm16232-201ENSMUST00000162856 167 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm8214-201ENSMUST00000172123 351 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm25956-201ENSMUST00000175115 217 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm27470-201ENSMUST00000184070 210 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm27286-201ENSMUST00000184934 179 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm29479-201ENSMUST00000190352 455 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm43828-201ENSMUST00000196890 639 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm43730-201ENSMUST00000199863 372 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm44054-201ENSMUST00000203814 372 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm3816-201ENSMUST00000209803 433 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm45815-201ENSMUST00000220241 146 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm7665-201ENSMUST00000076710 297 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm22704-201ENSMUST00000083027 137 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hoxd4P10628 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd4P10628 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd4P10628 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd4P10628 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd4P10628 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.9□□□□□ -1.79
Hoxd4P10628 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Hoxd4P10628 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd4P10628 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.89□□□□□ -1.79
Hoxd4P10628 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm38106-201ENSMUST00000194107 2534 ntBASIC3.89□□□□□ -1.79
Hoxd4P10628 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd4P10628 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm25537-201ENSMUST00000103851 109 ntBASIC3.89□□□□□ -1.79
Hoxd4P10628 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm26018-201ENSMUST00000104406 128 ntBASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm15112-201ENSMUST00000120152 860 ntBASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm13967-201ENSMUST00000120404 380 ntBASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm14591-201ENSMUST00000120407 518 ntBASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm14977-201ENSMUST00000121626 812 ntBASIC3.89□□□□□ -1.79
Hoxd4P10628 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm24191-201ENSMUST00000157977 122 ntBASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hoxd4P10628 Gm28163-201ENSMUST00000187099 325 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms