Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col3a1P08121 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Col3a1P08121 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col3a1P08121 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col3a1P08121 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm45223-201ENSMUST00000207037 5138 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col3a1P08121 Gm37470-201ENSMUST00000193378 2798 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col3a1P08121 Mir804-201ENSMUST00000103251 95 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm25111-201ENSMUST00000116686 147 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm14885-201ENSMUST00000117969 496 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm14530-201ENSMUST00000122391 333 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm23902-201ENSMUST00000157571 134 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm24780-201ENSMUST00000157635 143 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm22733-201ENSMUST00000158094 91 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm25284-201ENSMUST00000180345 141 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Mir6411-201ENSMUST00000183556 108 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Mir8118-201ENSMUST00000183962 129 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm28008-201ENSMUST00000184021 186 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm28412-201ENSMUST00000187243 177 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm3933-201ENSMUST00000195391 439 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm37119-201ENSMUST00000195691 389 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm44465-201ENSMUST00000199536 114 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm18704-201ENSMUST00000219736 446 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.6□□□□□ -1.83
Col3a1P08121 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm23975-201ENSMUST00000082685 106 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 Gm26072-201ENSMUST00000083135 107 ntBASIC3.6□□□□□ -1.83
Col3a1P08121 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col3a1P08121 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col3a1P08121 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col3a1P08121 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Col3a1P08121 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Col3a1P08121 Mir467h-201ENSMUST00000116759 121 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Gm26156-201ENSMUST00000116999 123 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Gm15312-201ENSMUST00000118827 271 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Gm15309-201ENSMUST00000121644 240 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 DQ267100-201ENSMUST00000122600 72 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC3.59□□□□□ -1.84
Col3a1P08121 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.59□□□□□ -1.84
Col3a1P08121 Gm22101-201ENSMUST00000157928 103 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Gm23024-201ENSMUST00000158770 292 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC3.59□□□□□ -1.84
Col3a1P08121 Mir7093-201ENSMUST00000184195 101 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Gm28629-201ENSMUST00000187309 263 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Gm28191-201ENSMUST00000189112 211 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Col3a1P08121 Gm43624-201ENSMUST00000197368 180 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.59□□□□□ -1.84
Col3a1P08121 Gm44718-201ENSMUST00000206886 359 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 AC167140.1-201ENSMUST00000224710 403 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Col3a1P08121 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col3a1P08121 Mir99a-201ENSMUST00000083596 65 ntBASIC3.59□□□□□ -1.84
Col3a1P08121 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Col3a1P08121 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Col3a1P08121 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col3a1P08121 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col3a1P08121 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Col3a1P08121 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Col3a1P08121 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.58□□□□□ -1.84
Col3a1P08121 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col3a1P08121 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Col3a1P08121 Gm15452-201ENSMUST00000119877 240 ntBASIC3.58□□□□□ -1.84
Col3a1P08121 Gm5287-201ENSMUST00000120666 598 ntBASIC3.58□□□□□ -1.84
Col3a1P08121 Gm15272-201ENSMUST00000120865 233 ntBASIC3.58□□□□□ -1.84
Col3a1P08121 Gm28534-201ENSMUST00000187744 676 ntBASIC3.58□□□□□ -1.84
Col3a1P08121 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC3.58□□□□□ -1.84
Col3a1P08121 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC3.58□□□□□ -1.84
Col3a1P08121 Gm44266-201ENSMUST00000205235 500 ntBASIC3.58□□□□□ -1.84
Col3a1P08121 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col3a1P08121 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC3.58□□□□□ -1.84
Col3a1P08121 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.58□□□□□ -1.84
Col3a1P08121 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.58□□□□□ -1.84
Col3a1P08121 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Col3a1P08121 Gm24043-201ENSMUST00000083108 116 ntBASIC3.58□□□□□ -1.84
Col3a1P08121 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Col3a1P08121 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Col3a1P08121 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
Col3a1P08121 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Col3a1P08121 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Col3a1P08121 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Col3a1P08121 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Col3a1P08121 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
Col3a1P08121 Mir344c-201ENSMUST00000103919 92 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm14670-201ENSMUST00000117327 337 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm12787-201ENSMUST00000119234 396 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm13627-201ENSMUST00000119700 706 ntBASIC3.57□□□□□ -1.84
Col3a1P08121 Gm14926-201ENSMUST00000120650 508 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms