Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm37946-201ENSMUST00000192064 347 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.13□□□□□ -1.91
Cldn5O54942 Gm37417-201ENSMUST00000195257 454 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Gm18551-201ENSMUST00000195594 642 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Gm24350-202ENSMUST00000198309 132 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.13□□□□□ -1.91
Cldn5O54942 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.13□□□□□ -1.91
Cldn5O54942 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cldn5O54942 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cldn5O54942 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cldn5O54942 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cldn5O54942 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cldn5O54942 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cldn5O54942 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cldn5O54942 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.12□□□□□ -1.91
Cldn5O54942 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Cldn5O54942 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cldn5O54942 Gm12782-201ENSMUST00000117519 727 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm14867-201ENSMUST00000120156 866 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm16021-201ENSMUST00000121176 219 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.12□□□□□ -1.91
Cldn5O54942 Gm22755-201ENSMUST00000157143 100 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm17187-201ENSMUST00000164622 410 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Mir5123-201ENSMUST00000177794 83 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cldn5O54942 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cldn5O54942 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cldn5O54942 Mir6993-201ENSMUST00000184912 65 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.12□□□□□ -1.91
Cldn5O54942 Gm29640-201ENSMUST00000187972 278 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm43652-201ENSMUST00000196219 675 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm46994-201ENSMUST00000221523 219 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm19563-201ENSMUST00000222031 270 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Gm5955-201ENSMUST00000222712 219 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.12□□□□□ -1.91
Cldn5O54942 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cldn5O54942 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cldn5O54942 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.11□□□□□ -1.91
Cldn5O54942 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Cldn5O54942 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn5O54942 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Cldn5O54942 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm24430-201ENSMUST00000104077 104 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm12102-201ENSMUST00000118251 604 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm15113-201ENSMUST00000119280 836 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn5O54942 Gm16354-201ENSMUST00000155376 150 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm23668-201ENSMUST00000157465 111 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.11□□□□□ -1.91
Cldn5O54942 Gm24100-201ENSMUST00000178592 79 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm26189-201ENSMUST00000179879 107 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm26928-201ENSMUST00000182674 572 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Cldn5O54942 Gm29641-201ENSMUST00000188955 259 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm38044-201ENSMUST00000192964 487 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.11□□□□□ -1.91
Cldn5O54942 Gm44449-201ENSMUST00000203610 153 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.11□□□□□ -1.91
Cldn5O54942 Gm44657-201ENSMUST00000208568 450 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm45814-201ENSMUST00000212646 775 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
Cldn5O54942 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm7984-201ENSMUST00000060640 538 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cldn5O54942 Gm25404-201ENSMUST00000082970 107 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Gm10212-201ENSMUST00000087884 324 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn5O54942 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
Cldn5O54942 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cldn5O54942 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.11□□□□□ -1.91
Cldn5O54942 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cldn5O54942 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cldn5O54942 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.1□□□□□ -1.91
Cldn5O54942 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cldn5O54942 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cldn5O54942 Gm25168-201ENSMUST00000104189 132 ntBASIC3.1□□□□□ -1.91
Cldn5O54942 Gm13482-201ENSMUST00000119842 254 ntBASIC3.1□□□□□ -1.91
Cldn5O54942 Gm15466-201ENSMUST00000122299 333 ntBASIC3.1□□□□□ -1.91
Cldn5O54942 Gm25807-201ENSMUST00000122783 305 ntBASIC3.1□□□□□ -1.91
Cldn5O54942 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.1□□□□□ -1.91
Cldn5O54942 Gm26101-201ENSMUST00000157246 105 ntBASIC3.1□□□□□ -1.91
Cldn5O54942 Gm17162-201ENSMUST00000168538 473 ntBASIC3.1□□□□□ -1.91
Cldn5O54942 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cldn5O54942 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cldn5O54942 Gm24897-201ENSMUST00000179033 107 ntBASIC3.1□□□□□ -1.91
Cldn5O54942 Gm28534-201ENSMUST00000187744 676 ntBASIC3.1□□□□□ -1.91
Cldn5O54942 Gm18982-201ENSMUST00000198118 529 ntBASIC3.1□□□□□ -1.91
Cldn5O54942 Gm44391-201ENSMUST00000198490 93 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 125.3 ms