Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm26928-201ENSMUST00000182674 572 ntBASIC3.62□□□□□ -1.83
Smarce1O54941 Gm27999-201ENSMUST00000183539 193 ntBASIC3.62□□□□□ -1.83
Smarce1O54941 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.62□□□□□ -1.83
Smarce1O54941 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Smarce1O54941 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.62□□□□□ -1.83
Smarce1O54941 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.62□□□□□ -1.83
Smarce1O54941 Gm18160-201ENSMUST00000214279 827 ntBASIC3.62□□□□□ -1.83
Smarce1O54941 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Smarce1O54941 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.62□□□□□ -1.83
Smarce1O54941 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Smarce1O54941 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.62□□□□□ -1.83
Smarce1O54941 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Smarce1O54941 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.62□□□□□ -1.83
Smarce1O54941 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.62□□□□□ -1.83
Smarce1O54941 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Smarce1O54941 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Smarce1O54941 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Smarce1O54941 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Smarce1O54941 Gm25272-201ENSMUST00000104293 128 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Smarce1O54941 Gm14751-201ENSMUST00000117693 222 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm11577-201ENSMUST00000118030 737 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm14739-201ENSMUST00000120424 802 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm23183-201ENSMUST00000122595 323 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm17117-201ENSMUST00000163665 299 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm23379-201ENSMUST00000180026 107 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Smarce1O54941 Gm27773-201ENSMUST00000184087 78 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm18185-201ENSMUST00000186725 667 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm38044-201ENSMUST00000192964 487 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm43224-201ENSMUST00000201567 898 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm45273-201ENSMUST00000211559 281 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm45400-201ENSMUST00000211603 653 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.61□□□□□ -1.83
Smarce1O54941 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Smarce1O54941 Gm22740-201ENSMUST00000083439 109 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Smarce1O54941 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.61□□□□□ -1.83
Smarce1O54941 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Smarce1O54941 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Smarce1O54941 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Smarce1O54941 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Smarce1O54941 Gm11490-201ENSMUST00000118128 272 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm14352-201ENSMUST00000119250 449 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm15112-201ENSMUST00000120152 860 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm13574-201ENSMUST00000120482 394 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm12770-201ENSMUST00000121734 462 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm23887-201ENSMUST00000122683 172 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.6□□□□□ -1.83
Smarce1O54941 Gm24008-201ENSMUST00000157733 138 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Smarce1O54941 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm23415-201ENSMUST00000175519 83 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Smarce1O54941 Gm25670-201ENSMUST00000178423 107 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm26239-201ENSMUST00000178842 107 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm21816-201ENSMUST00000179255 360 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm24267-201ENSMUST00000179841 107 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm29576-201ENSMUST00000188020 678 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.6□□□□□ -1.83
Smarce1O54941 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Smarce1O54941 Gm28354-201ENSMUST00000190904 678 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm44084-201ENSMUST00000203947 409 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm44208-201ENSMUST00000205199 421 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm45049-201ENSMUST00000207586 591 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm45232-201ENSMUST00000207811 162 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm45590-201ENSMUST00000209715 262 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.6□□□□□ -1.83
Smarce1O54941 Gm46233-201ENSMUST00000217831 449 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm17890-201ENSMUST00000221419 757 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm25202-201ENSMUST00000082838 191 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm24292-201ENSMUST00000082888 107 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Mir27a-201ENSMUST00000083510 87 ntBASIC3.6□□□□□ -1.83
Smarce1O54941 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Smarce1O54941 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Smarce1O54941 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Smarce1O54941 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Smarce1O54941 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.59□□□□□ -1.83
Smarce1O54941 Gm22771-201ENSMUST00000104449 91 ntBASIC3.59□□□□□ -1.83
Smarce1O54941 Gm14981-201ENSMUST00000117325 943 ntBASIC3.59□□□□□ -1.83
Smarce1O54941 Gm13751-201ENSMUST00000120280 752 ntBASIC3.59□□□□□ -1.83
Smarce1O54941 Gm15190-201ENSMUST00000120855 276 ntBASIC3.59□□□□□ -1.83
Smarce1O54941 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.59□□□□□ -1.83
Smarce1O54941 Gm22793-201ENSMUST00000157227 330 ntBASIC3.59□□□□□ -1.83
Smarce1O54941 Gm25667-201ENSMUST00000157701 275 ntBASIC3.59□□□□□ -1.83
Smarce1O54941 Gm22521-201ENSMUST00000158272 134 ntBASIC3.59□□□□□ -1.83
Smarce1O54941 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.59□□□□□ -1.83
Smarce1O54941 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC3.59□□□□□ -1.83
Smarce1O54941 Gm24315-201ENSMUST00000177835 127 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms