Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.11□□□□□ -2.07
Sdc4O35988 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.11□□□□□ -2.07
Sdc4O35988 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Sdc4O35988 Gm25796-201ENSMUST00000082645 163 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Gm22829-201ENSMUST00000083771 106 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.1□□□□□ -2.07
Sdc4O35988 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.1□□□□□ -2.07
Sdc4O35988 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Sdc4O35988 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.1□□□□□ -2.07
Sdc4O35988 Gm6429-201ENSMUST00000117144 475 ntBASIC2.1□□□□□ -2.07
Sdc4O35988 Gm16147-201ENSMUST00000162143 373 ntBASIC2.1□□□□□ -2.07
Sdc4O35988 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Sdc4O35988 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.1□□□□□ -2.07
Sdc4O35988 Gm28975-201ENSMUST00000186412 686 ntBASIC2.1□□□□□ -2.07
Sdc4O35988 Gm44533-201ENSMUST00000207782 268 ntBASIC2.1□□□□□ -2.07
Sdc4O35988 Gm45395-201ENSMUST00000209891 559 ntBASIC2.1□□□□□ -2.07
Sdc4O35988 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.1□□□□□ -2.07
Sdc4O35988 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.1□□□□□ -2.07
Sdc4O35988 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.1□□□□□ -2.07
Sdc4O35988 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.1□□□□□ -2.07
Sdc4O35988 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Sdc4O35988 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Sdc4O35988 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Sdc4O35988 Gm23950-201ENSMUST00000104026 129 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm23951-201ENSMUST00000104029 132 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm15846-201ENSMUST00000116022 320 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm14292-201ENSMUST00000118761 456 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm12495-201ENSMUST00000119750 447 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm14577-201ENSMUST00000121134 256 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm22727-201ENSMUST00000158090 116 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm23342-201ENSMUST00000158958 115 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm17064-201ENSMUST00000167690 452 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm37550-201ENSMUST00000193230 463 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm7443-201ENSMUST00000206355 378 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Sdc4O35988 Snora69-201ENSMUST00000083708 131 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Gm25005-201ENSMUST00000083812 156 ntBASIC2.09□□□□□ -2.07
Sdc4O35988 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
Sdc4O35988 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 Gm13588-201ENSMUST00000120026 135 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 Gm27443-201ENSMUST00000184660 98 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 Gm28627-201ENSMUST00000186141 453 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 Gm43512-201ENSMUST00000198495 176 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Sdc4O35988 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Sdc4O35988 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc4O35988 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
Sdc4O35988 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.08□□□□□ -2.08
Sdc4O35988 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Sdc4O35988 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Sdc4O35988 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Sdc4O35988 Gm14751-201ENSMUST00000117693 222 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Gm13640-201ENSMUST00000118445 264 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Gm6444-201ENSMUST00000119611 458 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Gm9225-201ENSMUST00000121921 836 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Gm24858-201ENSMUST00000158058 323 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Mir5099-201ENSMUST00000175257 74 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Gm44181-201ENSMUST00000203106 483 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Gm44520-201ENSMUST00000205447 802 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Gm45696-201ENSMUST00000212088 985 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Sdc4O35988 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Sdc4O35988 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Sdc4O35988 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.07□□□□□ -2.08
Sdc4O35988 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Sdc4O35988 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm14602-201ENSMUST00000118625 340 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Gm14588-201ENSMUST00000119895 172 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Gm14623-201ENSMUST00000121398 603 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Gm16328-201ENSMUST00000126985 196 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm24857-201ENSMUST00000158061 310 ntBASIC2.06□□□□□ -2.08
Sdc4O35988 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Sdc4O35988 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms