Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Clk3O35492 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Gm25967-201ENSMUST00000157168 147 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Gm17162-201ENSMUST00000168538 473 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Mir5127-201ENSMUST00000175295 71 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Mir713-201ENSMUST00000178651 108 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Gm22633-201ENSMUST00000179834 107 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Gm17781-201ENSMUST00000195232 649 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Gm37575-201ENSMUST00000195467 309 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.41□□□□□ -1.86
Clk3O35492 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC3.41□□□□□ -1.86
Clk3O35492 Gm2059-201ENSMUST00000212025 287 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Gm35857-201ENSMUST00000212739 178 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Gm4921-201ENSMUST00000219804 992 ntBASIC3.41□□□□□ -1.86
Clk3O35492 AC154747.1-201ENSMUST00000225265 239 ntBASIC3.41□□□□□ -1.86
Clk3O35492 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.41□□□□□ -1.86
Clk3O35492 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Clk3O35492 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Clk3O35492 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.4□□□□□ -1.86
Clk3O35492 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Clk3O35492 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Clk3O35492 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Clk3O35492 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Clk3O35492 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clk3O35492 Gm12492-201ENSMUST00000117665 564 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm12515-201ENSMUST00000120116 361 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm14392-201ENSMUST00000120332 401 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm14765-201ENSMUST00000121954 326 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm14413-201ENSMUST00000122158 408 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm25637-201ENSMUST00000157529 107 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm23583-201ENSMUST00000158533 289 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Clk3O35492 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clk3O35492 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clk3O35492 Gm20612-201ENSMUST00000176318 236 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm26335-201ENSMUST00000178449 107 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Mir6363-201ENSMUST00000184880 114 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.4□□□□□ -1.87
Clk3O35492 Gm29216-201ENSMUST00000187117 492 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Clk3O35492 Gm29192-201ENSMUST00000190942 377 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm32340-201ENSMUST00000192883 259 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Clk3O35492 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.4□□□□□ -1.87
Clk3O35492 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.4□□□□□ -1.87
Clk3O35492 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.4□□□□□ -1.87
Clk3O35492 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.4□□□□□ -1.87
Clk3O35492 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Clk3O35492 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.4□□□□□ -1.87
Clk3O35492 Gm44961-201ENSMUST00000207450 196 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC3.4□□□□□ -1.87
Clk3O35492 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm9818-201ENSMUST00000050900 255 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clk3O35492 Gm23614-201ENSMUST00000082598 107 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm23650-201ENSMUST00000083355 70 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Mir21a-201ENSMUST00000083521 92 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm23741-201ENSMUST00000097237 171 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clk3O35492 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clk3O35492 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clk3O35492 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.4□□□□□ -1.87
Clk3O35492 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Clk3O35492 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Clk3O35492 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Clk3O35492 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Clk3O35492 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Clk3O35492 Gm25169-201ENSMUST00000104190 129 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm13614-201ENSMUST00000117306 503 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm14570-201ENSMUST00000119444 391 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm8880-201ENSMUST00000121800 454 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
Clk3O35492 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.39□□□□□ -1.87
Clk3O35492 Gm22531-201ENSMUST00000158819 140 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm20534-201ENSMUST00000172957 172 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm22120-201ENSMUST00000175590 70 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Clk3O35492 Gm23816-201ENSMUST00000179617 132 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.39□□□□□ -1.87
Clk3O35492 Gm21673-201ENSMUST00000186640 436 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm21135-201ENSMUST00000189023 436 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Trbv24-201ENSMUST00000194614 347 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm8747-201ENSMUST00000195392 751 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.39□□□□□ -1.87
Clk3O35492 Gm44465-201ENSMUST00000199536 114 ntBASIC3.39□□□□□ -1.87
Clk3O35492 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Ear14-201ENSMUST00000049559 468 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm26228-201ENSMUST00000082512 107 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm25080-201ENSMUST00000082526 107 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm25135-201ENSMUST00000082648 143 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm25205-201ENSMUST00000082841 103 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Gm25518-201ENSMUST00000083864 107 ntBASIC3.39□□□□□ -1.87
Clk3O35492 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Clk3O35492 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Clk3O35492 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Clk3O35492 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Clk3O35492 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Clk3O35492 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms