Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm24951-201ENSMUST00000102182 109 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Mir761-201ENSMUST00000103245 76 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm11221-201ENSMUST00000117230 597 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm11576-201ENSMUST00000117433 417 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm14688-201ENSMUST00000119169 303 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm12156-201ENSMUST00000119188 554 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm6969-201ENSMUST00000140065 342 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm25913-201ENSMUST00000157617 135 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm22849-201ENSMUST00000157713 307 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm23257-201ENSMUST00000158322 132 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Mir5127-201ENSMUST00000175295 71 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm24757-201ENSMUST00000176987 371 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm26701-201ENSMUST00000181571 234 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Mir6960-201ENSMUST00000183449 61 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Mir6933-201ENSMUST00000184982 81 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm43510-201ENSMUST00000197922 353 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm44161-201ENSMUST00000203532 253 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm19786-201ENSMUST00000222589 580 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm6462-201ENSMUST00000081488 304 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Snord68-201ENSMUST00000082516 86 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm26263-201ENSMUST00000083281 164 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm23848-201ENSMUST00000083826 106 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm13085-201ENSMUST00000118356 171 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm7363-201ENSMUST00000119883 399 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm14926-201ENSMUST00000120650 508 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm15147-201ENSMUST00000122263 483 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm25104-201ENSMUST00000122476 163 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm22613-201ENSMUST00000122679 292 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm25294-201ENSMUST00000122791 104 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm22037-201ENSMUST00000157280 296 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm23078-201ENSMUST00000157848 148 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm23191-201ENSMUST00000179147 107 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm8532-201ENSMUST00000179174 461 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm24464-201ENSMUST00000179697 107 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm28069-201ENSMUST00000189926 214 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm44409-201ENSMUST00000198810 166 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm44016-201ENSMUST00000203463 164 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm44059-201ENSMUST00000204048 351 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm24626-201ENSMUST00000082621 161 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Snora70-201ENSMUST00000083047 137 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Mir34b-201ENSMUST00000083558 84 ntBASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shisa8J3QNX5 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shisa8J3QNX5 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms