Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm24984-201ENSMUST00000104454 133 ntBASIC2.97□□□□□ -1.93
Ccdc180J3QNE4 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc180J3QNE4 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC2.97□□□□□ -1.93
Ccdc180J3QNE4 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.96□□□□□ -1.94
Ccdc180J3QNE4 Gm28650-201ENSMUST00000188413 411 ntBASIC2.96□□□□□ -1.94
Ccdc180J3QNE4 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Ccdc180J3QNE4 Gm37455-201ENSMUST00000191993 529 ntBASIC2.96□□□□□ -1.94
Ccdc180J3QNE4 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC2.96□□□□□ -1.94
Ccdc180J3QNE4 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.96□□□□□ -1.94
Ccdc180J3QNE4 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.96□□□□□ -1.94
Ccdc180J3QNE4 Gm25279-201ENSMUST00000122608 133 ntBASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Gm3102-201ENSMUST00000164236 489 ntBASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Gm6395-201ENSMUST00000167639 691 ntBASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Mir3968-201ENSMUST00000175355 100 ntBASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Gm43489-201ENSMUST00000196810 993 ntBASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Gm14163-201ENSMUST00000117342 217 ntBASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.95□□□□□ -1.94
Ccdc180J3QNE4 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Mir1192-201ENSMUST00000116976 121 ntBASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Gm25958-201ENSMUST00000175114 71 ntBASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Mir6995-201ENSMUST00000183658 71 ntBASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Gm19089-201ENSMUST00000197207 613 ntBASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Gm2691-201ENSMUST00000203205 901 ntBASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Gm44849-201ENSMUST00000207595 484 ntBASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Ccdc180J3QNE4 Gm10997-201ENSMUST00000210294 1500 ntBASIC2.93□□□□□ -1.94
Ccdc180J3QNE4 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc180J3QNE4 Gm22149-201ENSMUST00000104442 136 ntBASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Gm28200-201ENSMUST00000187778 315 ntBASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Gm29378-201ENSMUST00000188723 315 ntBASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Gm28909-201ENSMUST00000189406 315 ntBASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Gm7182-201ENSMUST00000193351 732 ntBASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.92□□□□□ -1.94
Ccdc180J3QNE4 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.91□□□□□ -1.94
Ccdc180J3QNE4 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc180J3QNE4 Trbv22-201ENSMUST00000191697 291 ntBASIC2.91□□□□□ -1.94
Ccdc180J3QNE4 Gm16976-205ENSMUST00000227324 226 ntBASIC2.91□□□□□ -1.94
Ccdc180J3QNE4 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Ccdc180J3QNE4 Gm13194-201ENSMUST00000142299 311 ntBASIC2.9□□□□□ -1.95
Ccdc180J3QNE4 Gm22521-201ENSMUST00000158272 134 ntBASIC2.9□□□□□ -1.95
Ccdc180J3QNE4 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Ccdc180J3QNE4 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.9□□□□□ -1.95
Ccdc180J3QNE4 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Ccdc180J3QNE4 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.89□□□□□ -1.95
Ccdc180J3QNE4 Gm22665-201ENSMUST00000158720 275 ntBASIC2.89□□□□□ -1.95
Ccdc180J3QNE4 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.89□□□□□ -1.95
Ccdc180J3QNE4 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.89□□□□□ -1.95
Ccdc180J3QNE4 Gm36960-201ENSMUST00000195491 2035 ntBASIC2.89□□□□□ -1.95
Ccdc180J3QNE4 Gm22084-201ENSMUST00000157585 105 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Gm22843-201ENSMUST00000157710 134 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Gm28149-201ENSMUST00000187102 378 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Gm28768-201ENSMUST00000189034 378 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Gm19123-201ENSMUST00000190716 651 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Gm28404-201ENSMUST00000190242 453 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Gm43911-201ENSMUST00000203097 76 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.88□□□□□ -1.95
Ccdc180J3QNE4 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.87□□□□□ -1.95
Ccdc180J3QNE4 Gm28058-201ENSMUST00000186421 264 ntBASIC2.87□□□□□ -1.95
Ccdc180J3QNE4 Gm44011-201ENSMUST00000203336 394 ntBASIC2.87□□□□□ -1.95
Ccdc180J3QNE4 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.87□□□□□ -1.95
Ccdc180J3QNE4 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Ccdc180J3QNE4 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.87□□□□□ -1.95
Ccdc180J3QNE4 Gm14253-201ENSMUST00000122112 639 ntBASIC2.86□□□□□ -1.95
Ccdc180J3QNE4 Gm9022-202ENSMUST00000183285 483 ntBASIC2.86□□□□□ -1.95
Ccdc180J3QNE4 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Ccdc180J3QNE4 Gm45063-201ENSMUST00000203726 472 ntBASIC2.86□□□□□ -1.95
Ccdc180J3QNE4 Gm22245-201ENSMUST00000082479 103 ntBASIC2.86□□□□□ -1.95
Ccdc180J3QNE4 Gm23249-201ENSMUST00000083369 161 ntBASIC2.86□□□□□ -1.95
Ccdc180J3QNE4 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.86□□□□□ -1.95
Ccdc180J3QNE4 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Ccdc180J3QNE4 Mir7665-201ENSMUST00000184907 63 ntBASIC2.85□□□□□ -1.95
Ccdc180J3QNE4 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.85□□□□□ -1.95
Ccdc180J3QNE4 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.85□□□□□ -1.95
Ccdc180J3QNE4 Gm44288-201ENSMUST00000205061 2795 ntBASIC2.85□□□□□ -1.95
Ccdc180J3QNE4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Ccdc180J3QNE4 Gm25170-201ENSMUST00000104191 129 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms