Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.54□□□□□ -2.16
Col6a4A2AX52 Gm22971-201ENSMUST00000083305 97 ntBASIC1.54□□□□□ -2.16
Col6a4A2AX52 Mir448-201ENSMUST00000083516 112 ntBASIC1.54□□□□□ -2.16
Col6a4A2AX52 Gm23520-201ENSMUST00000093736 107 ntBASIC1.54□□□□□ -2.16
Col6a4A2AX52 Gm8292-201ENSMUST00000162574 396 ntBASIC1.53□□□□□ -2.16
Col6a4A2AX52 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Col6a4A2AX52 Mir7665-201ENSMUST00000184907 63 ntBASIC1.53□□□□□ -2.16
Col6a4A2AX52 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC1.53□□□□□ -2.16
Col6a4A2AX52 Trbv22-201ENSMUST00000191697 291 ntBASIC1.53□□□□□ -2.16
Col6a4A2AX52 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.53□□□□□ -2.16
Col6a4A2AX52 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.53□□□□□ -2.16
Col6a4A2AX52 Gm23140-201ENSMUST00000082487 107 ntBASIC1.53□□□□□ -2.16
Col6a4A2AX52 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Col6a4A2AX52 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
Col6a4A2AX52 Snord71-201ENSMUST00000104361 85 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Col6a4A2AX52 Gm22486-201ENSMUST00000116815 137 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Gm43406-201ENSMUST00000200356 334 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 AC241593.1-201ENSMUST00000224768 397 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col6a4A2AX52 Gm19335-201ENSMUST00000195836 2069 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 AC116557.1-201ENSMUST00000219494 1521 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Gm43404-201ENSMUST00000200424 2534 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Gm13460-201ENSMUST00000121274 353 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Gm24382-201ENSMUST00000122698 107 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Gm7909-201ENSMUST00000182688 614 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Trbv18-201ENSMUST00000194256 294 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Gm7726-201ENSMUST00000206241 231 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Col6a4A2AX52 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.52□□□□□ -2.17
Col6a4A2AX52 AC124433.2-201ENSMUST00000223867 291 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Olfr815-201ENSMUST00000071557 951 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Col6a4A2AX52 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.52□□□□□ -2.17
Col6a4A2AX52 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Col6a4A2AX52 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Col6a4A2AX52 Gm24541-201ENSMUST00000103871 96 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm13457-201ENSMUST00000117885 267 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm11483-201ENSMUST00000119839 247 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm26355-201ENSMUST00000158220 105 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm25606-201ENSMUST00000158363 95 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm26406-201ENSMUST00000158503 124 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Col6a4A2AX52 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm28802-201ENSMUST00000188624 944 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm37692-201ENSMUST00000192633 232 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm22897-201ENSMUST00000197860 128 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm42960-201ENSMUST00000202160 241 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm43954-201ENSMUST00000204634 544 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC1.51□□□□□ -2.17
Col6a4A2AX52 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Col6a4A2AX52 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm15095-201ENSMUST00000118996 1430 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Col6a4A2AX52 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Col6a4A2AX52 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm25170-201ENSMUST00000104191 129 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm4910-201ENSMUST00000119605 366 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm16331-201ENSMUST00000144274 498 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm5929-201ENSMUST00000166883 487 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm27894-201ENSMUST00000184177 92 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm44881-201ENSMUST00000205425 367 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm24313-201ENSMUST00000082561 133 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm44925-201ENSMUST00000208879 2110 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.51□□□□□ -2.17
Col6a4A2AX52 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm25496-201ENSMUST00000104430 120 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm12230-201ENSMUST00000118301 454 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm12294-201ENSMUST00000119723 490 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm13424-201ENSMUST00000122301 354 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Mir6394-201ENSMUST00000184738 99 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm29429-201ENSMUST00000187071 121 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 AC153975.1-201ENSMUST00000220087 926 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm25051-201ENSMUST00000158602 249 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm22858-201ENSMUST00000174972 76 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm24656-201ENSMUST00000177548 132 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm27155-201ENSMUST00000183716 898 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Mir6240-201ENSMUST00000184281 117 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm37417-201ENSMUST00000195257 454 ntBASIC1.5□□□□□ -2.17
Col6a4A2AX52 Gm45687-201ENSMUST00000209454 155 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms