Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm19637-201ENSMUST00000185933 579 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Npn2-202ENSMUST00000189275 235 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm43026-201ENSMUST00000202972 325 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm44118-201ENSMUST00000204665 229 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm44223-201ENSMUST00000204854 114 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm18703-201ENSMUST00000215318 333 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm10237-201ENSMUST00000078393 273 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm26108-201ENSMUST00000083973 191 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm25630-201ENSMUST00000084000 162 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H2afb1S4R1E0 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.98□□□□□ -1.93
H2afb1S4R1E0 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Mir294-201ENSMUST00000104710 84 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm7123-201ENSMUST00000117647 213 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm14292-201ENSMUST00000118761 456 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm12803-201ENSMUST00000118907 821 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm14906-201ENSMUST00000119265 390 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm14428-201ENSMUST00000120408 822 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm24961-201ENSMUST00000157918 184 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm25860-201ENSMUST00000158252 126 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Mir3964-201ENSMUST00000174898 74 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm19898-201ENSMUST00000177490 251 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm22166-201ENSMUST00000178419 121 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm23288-201ENSMUST00000179213 121 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Mir6899-201ENSMUST00000184798 64 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Mir6933-201ENSMUST00000184982 81 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm42622-201ENSMUST00000197229 355 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm2189-201ENSMUST00000201419 429 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm45400-201ENSMUST00000211603 653 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm5373-201ENSMUST00000212113 1050 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm4987-201ENSMUST00000078326 408 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm25586-201ENSMUST00000082499 112 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm23136-201ENSMUST00000083425 99 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
H2afb1S4R1E0 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.93
H2afb1S4R1E0 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.96□□□□□ -1.93
H2afb1S4R1E0 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
H2afb1S4R1E0 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
H2afb1S4R1E0 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Mir878-201ENSMUST00000104680 78 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm15282-201ENSMUST00000117707 300 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm15231-201ENSMUST00000119174 447 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm14240-201ENSMUST00000120353 546 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.96□□□□□ -1.94
H2afb1S4R1E0 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm13901-201ENSMUST00000137252 468 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm22561-201ENSMUST00000157331 84 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm25706-201ENSMUST00000157828 247 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm26141-201ENSMUST00000175299 126 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm20689-201ENSMUST00000176033 279 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm4761-201ENSMUST00000178086 582 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Mir6405-201ENSMUST00000184584 124 ntBASIC2.96□□□□□ -1.94
H2afb1S4R1E0 Gm27539-201ENSMUST00000184971 224 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms