Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm14877-201ENSMUST00000119803 478 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm15244-201ENSMUST00000121122 130 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm24629-201ENSMUST00000122762 89 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm12854-201ENSMUST00000128518 297 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm26153-201ENSMUST00000157433 127 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm24750-201ENSMUST00000157843 104 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm2389-201ENSMUST00000160487 189 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Mir8106-201ENSMUST00000184520 139 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm29014-201ENSMUST00000191422 326 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm43529-201ENSMUST00000199178 412 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm44485-201ENSMUST00000199569 137 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm44184-201ENSMUST00000204290 132 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Olfr1285-201ENSMUST00000208523 903 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm3816-201ENSMUST00000209803 433 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 AC126267.1-201ENSMUST00000214282 284 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm7665-201ENSMUST00000076710 297 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Snord47-201ENSMUST00000083034 77 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 AC122840.2-201ENSMUST00000221030 2659 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 CT025577.1-201ENSMUST00000220862 2846 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm8145-201ENSMUST00000118220 745 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm11398-201ENSMUST00000120330 320 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm24481-201ENSMUST00000157210 102 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm17187-201ENSMUST00000164622 410 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm21816-201ENSMUST00000179255 360 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm25121-201ENSMUST00000179846 79 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm20203-201ENSMUST00000192352 332 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm37601-201ENSMUST00000194922 394 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Mir6994-201ENSMUST00000198985 73 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Snord15b-201ENSMUST00000083032 145 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Prpf40aQ9R1C7 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm23746-201ENSMUST00000104229 125 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm14652-201ENSMUST00000118479 235 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Mir6335-201ENSMUST00000184081 98 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm5372-201ENSMUST00000187540 409 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm36946-201ENSMUST00000192706 435 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Trbv11-201ENSMUST00000194354 260 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm42647-201ENSMUST00000195939 459 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm42579-201ENSMUST00000200512 734 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Prpf40aQ9R1C7 Gm37879-201ENSMUST00000193112 1995 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm13491-201ENSMUST00000118267 235 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm15029-201ENSMUST00000119742 199 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm14037-201ENSMUST00000120576 313 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm12155-201ENSMUST00000121267 160 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm22098-201ENSMUST00000157930 85 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Mir3062-201ENSMUST00000174986 105 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm23415-201ENSMUST00000175519 83 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm24487-201ENSMUST00000178017 63 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm27355-201ENSMUST00000185045 128 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Mir6418-201ENSMUST00000185075 115 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm17766-201ENSMUST00000209223 442 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 Gm45859-201ENSMUST00000212794 214 ntBASIC5.25□□□□□ -1.57
Prpf40aQ9R1C7 CT009713.6-201ENSMUST00000223615 294 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms