Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm16326-201ENSMUST00000162843 414 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Gm16561-201ENSMUST00000163001 192 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Gm17538-201ENSMUST00000168236 327 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Mir7578-201ENSMUST00000183455 82 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Gm27161-201ENSMUST00000183960 562 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Gm29335-201ENSMUST00000188361 459 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Gm43368-201ENSMUST00000200638 409 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Gm45395-201ENSMUST00000209891 559 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 CT571268.1-201ENSMUST00000222320 407 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Trem3Q9JKE1 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.84□□□□□ -2.12
Trem3Q9JKE1 AC164297.6-201ENSMUST00000224643 1568 ntBASIC1.84□□□□□ -2.12
Trem3Q9JKE1 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.84□□□□□ -2.12
Trem3Q9JKE1 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm22752-201ENSMUST00000102083 109 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm12386-201ENSMUST00000117380 688 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm15126-201ENSMUST00000118631 833 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm14588-201ENSMUST00000119895 172 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm14881-201ENSMUST00000120366 372 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm25270-201ENSMUST00000122606 138 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm16510-201ENSMUST00000153501 249 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm24900-201ENSMUST00000158128 134 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm25866-201ENSMUST00000158245 112 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm22769-201ENSMUST00000158367 98 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm17655-201ENSMUST00000167969 255 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm43224-201ENSMUST00000201567 898 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm44665-201ENSMUST00000205381 251 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm45696-201ENSMUST00000212088 985 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trem3Q9JKE1 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trem3Q9JKE1 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm22249-201ENSMUST00000082485 136 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.83□□□□□ -2.12
Trem3Q9JKE1 Gm38071-201ENSMUST00000195792 3378 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm13082-201ENSMUST00000118877 561 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm14800-201ENSMUST00000122084 1272 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm24958-201ENSMUST00000158009 97 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm17064-201ENSMUST00000167690 452 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm23402-201ENSMUST00000178130 107 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm24019-201ENSMUST00000178620 107 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm26243-201ENSMUST00000179260 107 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm28779-201ENSMUST00000189678 323 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm17935-201ENSMUST00000196649 772 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm18982-201ENSMUST00000198118 529 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm7443-201ENSMUST00000206355 378 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm45049-201ENSMUST00000207586 591 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm7675-201ENSMUST00000208828 686 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm46234-201ENSMUST00000218702 259 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 CT009713.6-201ENSMUST00000223615 294 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm23296-201ENSMUST00000082555 107 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm24859-201ENSMUST00000082729 107 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm23723-201ENSMUST00000082996 132 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trem3Q9JKE1 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.82□□□□□ -2.12
Trem3Q9JKE1 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm14125-201ENSMUST00000113442 680 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm14517-201ENSMUST00000119040 337 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm15466-201ENSMUST00000122299 333 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm24937-201ENSMUST00000122597 134 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm22560-201ENSMUST00000157332 120 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm26186-201ENSMUST00000157689 125 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm24905-201ENSMUST00000158129 104 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm22517-201ENSMUST00000158265 136 ntBASIC1.81□□□□□ -2.12
Trem3Q9JKE1 Gm23005-201ENSMUST00000158950 136 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms