Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm5655-201ENSMUST00000221078 901 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm26494-201ENSMUST00000083154 143 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm24493-201ENSMUST00000083805 143 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm14751-201ENSMUST00000117693 222 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm12238-201ENSMUST00000127764 124 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm22390-201ENSMUST00000157588 325 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm24773-201ENSMUST00000158513 99 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm7858-201ENSMUST00000190177 622 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm37708-201ENSMUST00000192337 895 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm29747-201ENSMUST00000194764 585 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Gm17935-201ENSMUST00000196649 772 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Olfr815-201ENSMUST00000071557 951 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.39□□□□□ -2.03
Lima1Q9ERG0 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Lima1Q9ERG0 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm14940-201ENSMUST00000119309 495 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm23867-201ENSMUST00000122649 274 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm43096-201ENSMUST00000196173 421 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm17937-201ENSMUST00000197908 742 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Mir7232-201ENSMUST00000197929 74 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm43224-201ENSMUST00000201567 898 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm44088-201ENSMUST00000204595 237 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm45445-201ENSMUST00000209586 232 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Gm25796-201ENSMUST00000082645 163 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Mir193a-201ENSMUST00000083461 66 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Olfr895-201ENSMUST00000093864 951 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.38□□□□□ -2.03
Lima1Q9ERG0 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm14020-201ENSMUST00000118165 662 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm13424-201ENSMUST00000122301 354 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm26041-201ENSMUST00000158148 108 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm24210-201ENSMUST00000158263 133 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Mir5099-201ENSMUST00000175257 74 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Mir7013-201ENSMUST00000183540 72 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm28169-201ENSMUST00000190342 345 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm19202-201ENSMUST00000198096 808 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Mir3069-201ENSMUST00000198802 65 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm35262-201ENSMUST00000215133 267 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Gm22005-201ENSMUST00000082795 141 ntBASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Lima1Q9ERG0 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm24670-201ENSMUST00000104154 132 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm23747-201ENSMUST00000104228 131 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm11460-201ENSMUST00000118200 361 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm11943-201ENSMUST00000119473 327 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm15103-201ENSMUST00000119893 871 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm13862-201ENSMUST00000121220 197 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm25153-201ENSMUST00000157118 156 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm15900-201ENSMUST00000161584 342 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm22392-201ENSMUST00000177971 107 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Mir6402-201ENSMUST00000183406 80 ntBASIC2.36□□□□□ -2.03
Lima1Q9ERG0 Gm27470-201ENSMUST00000184070 210 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 173.8 ms