Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.27□□□□□ -1.89
Scn4aQ9ER60 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.27□□□□□ -1.89
Scn4aQ9ER60 Gm24340-201ENSMUST00000104208 97 ntBASIC3.27□□□□□ -1.89
Scn4aQ9ER60 Gm15193-201ENSMUST00000120224 865 ntBASIC3.27□□□□□ -1.89
Scn4aQ9ER60 Gm24394-201ENSMUST00000158141 123 ntBASIC3.27□□□□□ -1.89
Scn4aQ9ER60 Gm20526-201ENSMUST00000173416 158 ntBASIC3.27□□□□□ -1.89
Scn4aQ9ER60 Gm43406-201ENSMUST00000200356 334 ntBASIC3.27□□□□□ -1.89
Scn4aQ9ER60 Gm44181-201ENSMUST00000203106 483 ntBASIC3.27□□□□□ -1.89
Scn4aQ9ER60 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.27□□□□□ -1.89
Scn4aQ9ER60 AC154424.1-201ENSMUST00000225883 799 ntBASIC3.27□□□□□ -1.89
Scn4aQ9ER60 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn4aQ9ER60 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Scn4aQ9ER60 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Scn4aQ9ER60 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm12509-201ENSMUST00000118033 609 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm14541-201ENSMUST00000118985 157 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm11429-201ENSMUST00000119089 144 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm24076-201ENSMUST00000158179 94 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm8161-201ENSMUST00000168739 481 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm38329-201ENSMUST00000193473 427 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm18338-201ENSMUST00000222381 560 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm23109-201ENSMUST00000116867 126 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm9225-201ENSMUST00000121921 836 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm25807-201ENSMUST00000122783 305 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm24010-201ENSMUST00000157731 282 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm43407-201ENSMUST00000199816 317 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm44615-201ENSMUST00000206548 358 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm5670-201ENSMUST00000093546 372 ntBASIC3.26□□□□□ -1.89
Scn4aQ9ER60 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm24771-201ENSMUST00000158508 137 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm22891-201ENSMUST00000158641 164 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm20542-201ENSMUST00000174582 372 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Mir7679-201ENSMUST00000183379 63 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm27477-201ENSMUST00000184649 143 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm38214-201ENSMUST00000192581 988 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm37993-201ENSMUST00000195301 988 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm38018-201ENSMUST00000195651 540 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm18598-201ENSMUST00000207724 597 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm6112-201ENSMUST00000208037 629 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.25□□□□□ -1.89
Scn4aQ9ER60 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Scn4aQ9ER60 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm14119-201ENSMUST00000119511 235 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm12881-201ENSMUST00000121191 203 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm25606-201ENSMUST00000158363 95 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm26171-201ENSMUST00000158422 131 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm23385-201ENSMUST00000158592 295 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm42976-201ENSMUST00000200313 222 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm43228-201ENSMUST00000200735 264 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 AC115357.1-201ENSMUST00000227575 466 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm23628-201ENSMUST00000082464 173 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm22806-201ENSMUST00000082738 136 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Scn4aQ9ER60 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm12935-201ENSMUST00000119352 246 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm3851-201ENSMUST00000168653 318 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm9613-201ENSMUST00000171662 196 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm18727-201ENSMUST00000185981 553 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm38332-201ENSMUST00000194189 147 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.23□□□□□ -1.89
Scn4aQ9ER60 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms