Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 Gm23714-201ENSMUST00000179259 105 ntBASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 Gm37054-201ENSMUST00000193481 543 ntBASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 Gm45192-201ENSMUST00000206749 283 ntBASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 Mir148b-201ENSMUST00000083626 97 ntBASIC2.45□□□□□ -2.02
Cpsf1Q9EPU4 Gm9440-201ENSMUST00000119667 539 ntBASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Gm37417-201ENSMUST00000195257 454 ntBASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Gm43431-201ENSMUST00000198577 340 ntBASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Mir7217-201ENSMUST00000200304 62 ntBASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cpsf1Q9EPU4 Gm25068-201ENSMUST00000103895 110 ntBASIC2.43□□□□□ -2.02
Cpsf1Q9EPU4 Gm15159-201ENSMUST00000117062 764 ntBASIC2.43□□□□□ -2.02
Cpsf1Q9EPU4 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.43□□□□□ -2.02
Cpsf1Q9EPU4 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Cpsf1Q9EPU4 Gm7094-201ENSMUST00000178379 366 ntBASIC2.43□□□□□ -2.02
Cpsf1Q9EPU4 Gm38238-201ENSMUST00000194334 346 ntBASIC2.43□□□□□ -2.02
Cpsf1Q9EPU4 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Cpsf1Q9EPU4 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Cpsf1Q9EPU4 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Cpsf1Q9EPU4 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Gm26099-201ENSMUST00000157248 109 ntBASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Gm44555-201ENSMUST00000209008 148 ntBASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Gm25402-201ENSMUST00000082966 131 ntBASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Cpsf1Q9EPU4 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Gm16383-201ENSMUST00000118122 232 ntBASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Gm12934-201ENSMUST00000119221 343 ntBASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Gm12495-201ENSMUST00000119750 447 ntBASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Gm3104-201ENSMUST00000171004 473 ntBASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Gm6801-201ENSMUST00000190697 339 ntBASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Gm18433-201ENSMUST00000192747 197 ntBASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Gm2142-201ENSMUST00000197899 589 ntBASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Snord14d-201ENSMUST00000083424 86 ntBASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Cpsf1Q9EPU4 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Cpsf1Q9EPU4 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.4□□□□□ -2.02
Cpsf1Q9EPU4 Mir6379-201ENSMUST00000183392 115 ntBASIC2.4□□□□□ -2.03
Cpsf1Q9EPU4 Gm27762-201ENSMUST00000183417 109 ntBASIC2.4□□□□□ -2.03
Cpsf1Q9EPU4 AC079644.1-201ENSMUST00000220586 405 ntBASIC2.4□□□□□ -2.03
Cpsf1Q9EPU4 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.4□□□□□ -2.03
Cpsf1Q9EPU4 Gm5471-201ENSMUST00000072732 337 ntBASIC2.4□□□□□ -2.03
Cpsf1Q9EPU4 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Cpsf1Q9EPU4 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.4□□□□□ -2.03
Cpsf1Q9EPU4 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.4□□□□□ -2.03
Cpsf1Q9EPU4 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.39□□□□□ -2.03
Cpsf1Q9EPU4 Mir301b-201ENSMUST00000102333 97 ntBASIC2.39□□□□□ -2.03
Cpsf1Q9EPU4 Mir147-201ENSMUST00000102354 79 ntBASIC2.39□□□□□ -2.03
Cpsf1Q9EPU4 Gm25279-201ENSMUST00000122608 133 ntBASIC2.39□□□□□ -2.03
Cpsf1Q9EPU4 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.39□□□□□ -2.03
Cpsf1Q9EPU4 Gm17064-201ENSMUST00000167690 452 ntBASIC2.39□□□□□ -2.03
Cpsf1Q9EPU4 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.39□□□□□ -2.03
Cpsf1Q9EPU4 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf1Q9EPU4 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.39□□□□□ -2.03
Cpsf1Q9EPU4 Gm24889-201ENSMUST00000104388 132 ntBASIC2.38□□□□□ -2.03
Cpsf1Q9EPU4 Gm26181-201ENSMUST00000157687 106 ntBASIC2.38□□□□□ -2.03
Cpsf1Q9EPU4 Gm24572-201ENSMUST00000175505 88 ntBASIC2.38□□□□□ -2.03
Cpsf1Q9EPU4 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.38□□□□□ -2.03
Cpsf1Q9EPU4 AC153936.1-201ENSMUST00000219874 395 ntBASIC2.38□□□□□ -2.03
Cpsf1Q9EPU4 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.38□□□□□ -2.03
Cpsf1Q9EPU4 Gm24984-201ENSMUST00000104454 133 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms