Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm24757-201ENSMUST00000176987 371 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cdc40Q9DC48 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.58□□□□□ -2
Cdc40Q9DC48 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm24446-201ENSMUST00000083982 156 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdc40Q9DC48 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Cdc40Q9DC48 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cdc40Q9DC48 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdc40Q9DC48 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm23691-201ENSMUST00000101878 107 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm25466-201ENSMUST00000103995 132 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm13349-201ENSMUST00000118436 411 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm15272-201ENSMUST00000120865 233 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm12876-201ENSMUST00000120975 408 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm14821-201ENSMUST00000121975 435 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm14562-201ENSMUST00000129885 543 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm23470-201ENSMUST00000157129 120 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm24876-201ENSMUST00000158780 92 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm23473-201ENSMUST00000158883 116 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.57□□□□□ -2
Cdc40Q9DC48 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm37007-201ENSMUST00000194234 319 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm44476-201ENSMUST00000196225 91 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm43384-201ENSMUST00000200569 637 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 AC153522.1-201ENSMUST00000220047 1090 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cdc40Q9DC48 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cdc40Q9DC48 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.57□□□□□ -2
Cdc40Q9DC48 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Cdc40Q9DC48 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm25500-201ENSMUST00000104426 123 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm13424-201ENSMUST00000122301 354 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.56□□□□□ -2
Cdc40Q9DC48 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cdc40Q9DC48 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Snord93-201ENSMUST00000175580 71 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm26960-201ENSMUST00000182263 412 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm27582-201ENSMUST00000184084 126 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm29597-201ENSMUST00000188035 308 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm9696-202ENSMUST00000191541 830 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm30341-201ENSMUST00000194363 289 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm34314-201ENSMUST00000203622 367 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm44966-201ENSMUST00000208096 157 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Cdc40Q9DC48 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cdc40Q9DC48 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.56□□□□□ -2
Cdc40Q9DC48 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Cdc40Q9DC48 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm13194-201ENSMUST00000142299 311 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm25280-201ENSMUST00000157269 101 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm24879-201ENSMUST00000158386 143 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Mir6411-201ENSMUST00000183556 108 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm28647-201ENSMUST00000188416 197 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm43355-201ENSMUST00000196541 346 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.55□□□□□ -2
Cdc40Q9DC48 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cdc40Q9DC48 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cdc40Q9DC48 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Gm18026-201ENSMUST00000222789 727 ntBASIC2.55□□□□□ -2
Cdc40Q9DC48 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cdc40Q9DC48 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms