Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm29299-201ENSMUST00000185609 923 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm29573-201ENSMUST00000190291 919 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm17937-201ENSMUST00000197908 742 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm44060-201ENSMUST00000204440 410 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Ccdc3Q9D6Y1 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm22658-201ENSMUST00000104196 155 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm23551-201ENSMUST00000116852 121 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm14517-201ENSMUST00000119040 337 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm22885-201ENSMUST00000157410 107 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm29740-201ENSMUST00000193182 655 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm35262-201ENSMUST00000215133 267 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm19233-201ENSMUST00000219772 936 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ccdc3Q9D6Y1 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Ccdc3Q9D6Y1 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
Ccdc3Q9D6Y1 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm26143-201ENSMUST00000104480 108 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm14069-201ENSMUST00000120815 229 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm25107-201ENSMUST00000122472 129 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm23600-201ENSMUST00000157260 71 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm22392-201ENSMUST00000177971 107 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm27399-201ENSMUST00000184250 78 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm27608-201ENSMUST00000184822 162 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm27959-201ENSMUST00000185172 111 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm38018-201ENSMUST00000195651 540 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm42828-201ENSMUST00000199669 469 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm44161-201ENSMUST00000203532 253 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm44088-201ENSMUST00000204595 237 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.4□□□□□ -2.03
Ccdc3Q9D6Y1 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.39□□□□□ -2.03
Ccdc3Q9D6Y1 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms