Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Sf3a3Q9D554 Mir21a-201ENSMUST00000083521 92 ntBASIC3.56□□□□□ -1.84
Sf3a3Q9D554 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Sf3a3Q9D554 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Sf3a3Q9D554 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Sf3a3Q9D554 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Sf3a3Q9D554 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm11577-201ENSMUST00000118030 737 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm9043-201ENSMUST00000119677 314 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm6079-201ENSMUST00000121356 404 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm22452-201ENSMUST00000122804 104 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm25624-201ENSMUST00000157222 275 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm25283-201ENSMUST00000157272 77 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm24244-201ENSMUST00000157317 130 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm26312-201ENSMUST00000157769 165 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm24546-201ENSMUST00000158652 102 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm6374-201ENSMUST00000159051 788 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm28779-201ENSMUST00000189678 323 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm19219-201ENSMUST00000215863 724 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 AC117240.2-201ENSMUST00000220921 263 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 AC158981.3-202ENSMUST00000228906 523 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Gm22974-201ENSMUST00000083301 103 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sf3a3Q9D554 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm23987-201ENSMUST00000117039 129 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm12787-201ENSMUST00000119234 396 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm11600-201ENSMUST00000119592 240 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 AA413626-201ENSMUST00000121125 494 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Scarna6-201ENSMUST00000158656 265 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm23028-201ENSMUST00000158773 265 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm20534-201ENSMUST00000172957 172 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Mir7056-201ENSMUST00000183776 59 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Mir7093-201ENSMUST00000184195 101 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm28399-201ENSMUST00000186221 318 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm28572-201ENSMUST00000187444 318 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm28155-201ENSMUST00000191066 151 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm32447-201ENSMUST00000194265 697 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm43853-201ENSMUST00000197162 301 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm42526-201ENSMUST00000198956 393 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm44099-201ENSMUST00000203299 112 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm8820-201ENSMUST00000204077 571 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm19244-201ENSMUST00000204340 253 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm45101-201ENSMUST00000208327 232 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm25578-201ENSMUST00000083406 104 ntBASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sf3a3Q9D554 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sf3a3Q9D554 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.53□□□□□ -1.84
Sf3a3Q9D554 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sf3a3Q9D554 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sf3a3Q9D554 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Sf3a3Q9D554 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sf3a3Q9D554 Gm12328-201ENSMUST00000118611 197 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms