Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Gm7209-201ENSMUST00000122339 333 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Gm18397-201ENSMUST00000176704 587 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Gm26960-201ENSMUST00000182263 412 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Mir6338-201ENSMUST00000183389 109 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Mir6411-201ENSMUST00000183556 108 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Mir6386-201ENSMUST00000183558 104 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Gm27330-201ENSMUST00000184689 132 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Gm6060-201ENSMUST00000188671 251 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Gm6651-201ENSMUST00000189471 271 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Gm19202-201ENSMUST00000198096 808 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.16□□□□□ -1.9
Ccdc47Q9D024 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc47Q9D024 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm13085-201ENSMUST00000118356 171 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm14506-201ENSMUST00000121165 536 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm25373-201ENSMUST00000158156 115 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm24681-201ENSMUST00000158760 107 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Mir6402-201ENSMUST00000183406 80 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm28647-201ENSMUST00000188416 197 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm29460-201ENSMUST00000188607 714 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm28779-201ENSMUST00000189678 323 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm37866-201ENSMUST00000191950 696 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm31520-201ENSMUST00000203048 733 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm43979-201ENSMUST00000203179 475 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm20948-201ENSMUST00000211091 449 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc47Q9D024 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc47Q9D024 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm23264-201ENSMUST00000083372 107 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc47Q9D024 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Mir542-201ENSMUST00000102186 85 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm23128-201ENSMUST00000104257 132 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm26473-201ENSMUST00000116763 127 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm14566-201ENSMUST00000118915 321 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm12155-201ENSMUST00000121267 160 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm24291-201ENSMUST00000157633 162 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm25666-201ENSMUST00000157702 107 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm22651-201ENSMUST00000157872 94 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Mir3965-201ENSMUST00000175570 69 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm18448-201ENSMUST00000186286 599 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm29192-201ENSMUST00000190942 377 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm37807-201ENSMUST00000194310 190 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm23128-202ENSMUST00000196578 133 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc47Q9D024 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm22249-201ENSMUST00000082485 136 ntBASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc47Q9D024 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc47Q9D024 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm14982-201ENSMUST00000121102 442 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm11321-201ENSMUST00000121257 902 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm12706-201ENSMUST00000121588 698 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm26088-201ENSMUST00000157896 131 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm16236-201ENSMUST00000159588 379 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm17183-201ENSMUST00000171170 493 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm24082-201ENSMUST00000175175 83 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm27520-201ENSMUST00000184872 81 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm37708-201ENSMUST00000192337 895 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.13□□□□□ -1.91
Ccdc47Q9D024 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm23723-201ENSMUST00000082996 132 ntBASIC3.13□□□□□ -1.91
Ccdc47Q9D024 Gm25199-201ENSMUST00000083095 104 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms