Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm42832-201ENSMUST00000196361 745 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm34779-201ENSMUST00000210036 263 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm45380-201ENSMUST00000210465 315 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 AC123062.1-201ENSMUST00000221287 481 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 AC112972.1-201ENSMUST00000227329 365 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm25480-201ENSMUST00000083217 133 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm23848-201ENSMUST00000083826 106 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm24096-201ENSMUST00000103905 110 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Mir291a-201ENSMUST00000104815 82 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm9119-201ENSMUST00000118866 495 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm14417-201ENSMUST00000120036 1074 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm14810-201ENSMUST00000121628 486 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm14362-201ENSMUST00000121679 273 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm12368-201ENSMUST00000122251 434 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm15254-201ENSMUST00000149567 273 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm23981-201ENSMUST00000157136 106 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm23234-201ENSMUST00000157304 134 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm22310-201ENSMUST00000157509 116 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm24532-201ENSMUST00000157951 286 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm25438-201ENSMUST00000158281 110 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm22841-201ENSMUST00000158443 62 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Mir3964-201ENSMUST00000174898 74 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm24100-201ENSMUST00000178592 79 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm4076-201ENSMUST00000179230 965 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm24137-201ENSMUST00000180055 79 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm22391-201ENSMUST00000180356 79 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm27236-201ENSMUST00000184147 442 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm42665-201ENSMUST00000202100 586 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm44609-201ENSMUST00000207157 460 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm45400-201ENSMUST00000211603 653 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm26055-201ENSMUST00000083038 107 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Gm26108-201ENSMUST00000083973 191 ntBASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Ddx28Q9CWT6 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm14594-201ENSMUST00000118052 537 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm14975-201ENSMUST00000118741 664 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm14590-201ENSMUST00000118934 537 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm8217-201ENSMUST00000119136 465 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm15026-201ENSMUST00000119219 458 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm15244-201ENSMUST00000121122 130 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm14366-201ENSMUST00000121970 730 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm23078-201ENSMUST00000157848 148 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm24534-201ENSMUST00000157949 291 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm25224-201ENSMUST00000158195 68 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm17538-201ENSMUST00000168236 327 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm14596-201ENSMUST00000180268 537 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm14595-201ENSMUST00000180335 537 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm27957-201ENSMUST00000184054 127 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm37757-201ENSMUST00000193072 210 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm38395-201ENSMUST00000199904 830 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm44923-201ENSMUST00000206673 85 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm44513-201ENSMUST00000206811 439 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm46193-201ENSMUST00000219399 364 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.17□□□□□ -1.9
Ddx28Q9CWT6 Gm22508-201ENSMUST00000082772 110 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms