Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm2066-201ENSMUST00000118046 389 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm11268-201ENSMUST00000118347 267 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm2318-201ENSMUST00000119623 639 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm12640-201ENSMUST00000120097 310 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm2005-201ENSMUST00000120759 542 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm11321-201ENSMUST00000121257 902 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm11471-201ENSMUST00000121824 198 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Mir3092-201ENSMUST00000174954 96 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm7438-201ENSMUST00000177664 639 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm7408-201ENSMUST00000178014 639 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm7386-201ENSMUST00000178020 639 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm3657-201ENSMUST00000178170 639 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm7415-201ENSMUST00000178205 639 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm7398-201ENSMUST00000178589 639 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm7391-201ENSMUST00000178680 639 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm7375-201ENSMUST00000179232 639 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm3681-201ENSMUST00000179940 639 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm43746-201ENSMUST00000200028 317 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm5317-201ENSMUST00000204445 847 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm20541-201ENSMUST00000173035 1406 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm23691-201ENSMUST00000101878 107 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm13603-201ENSMUST00000119404 83 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm5937-201ENSMUST00000119715 643 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm14159-201ENSMUST00000119832 451 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm11819-201ENSMUST00000122192 372 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm26041-201ENSMUST00000158148 108 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm16111-201ENSMUST00000162128 285 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm27527-201ENSMUST00000183903 99 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Mir6372-201ENSMUST00000185114 109 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm37213-201ENSMUST00000193077 586 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm24350-202ENSMUST00000198309 132 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.3□□□□□ -1.88
Smc1aQ9CU62 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.3□□□□□ -1.88
Smc1aQ9CU62 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.3□□□□□ -1.88
Smc1aQ9CU62 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Smc1aQ9CU62 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm13239-201ENSMUST00000119920 637 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm14069-201ENSMUST00000120815 229 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm26477-201ENSMUST00000122617 323 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm14562-201ENSMUST00000129885 543 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm23777-201ENSMUST00000158994 259 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm17187-201ENSMUST00000164622 410 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm25470-201ENSMUST00000175576 111 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm28628-201ENSMUST00000187006 264 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm28629-201ENSMUST00000187309 263 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm43104-201ENSMUST00000197234 311 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Gm29920-201ENSMUST00000206876 754 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 AC153968.2-201ENSMUST00000215579 1140 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.29□□□□□ -1.88
Smc1aQ9CU62 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Smc1aQ9CU62 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Mir878-201ENSMUST00000104680 78 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm13751-201ENSMUST00000120280 752 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm14915-201ENSMUST00000120747 204 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm13424-201ENSMUST00000122301 354 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm23213-201ENSMUST00000122715 313 ntBASIC3.28□□□□□ -1.88
Smc1aQ9CU62 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms