Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.56□□□□□ -2
Use1Q9CQ56 Gm29460-201ENSMUST00000188607 714 ntBASIC2.56□□□□□ -2
Use1Q9CQ56 Gm28744-201ENSMUST00000189939 340 ntBASIC2.56□□□□□ -2
Use1Q9CQ56 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.56□□□□□ -2
Use1Q9CQ56 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Use1Q9CQ56 Gm45288-201ENSMUST00000210236 151 ntBASIC2.56□□□□□ -2
Use1Q9CQ56 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.56□□□□□ -2
Use1Q9CQ56 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.56□□□□□ -2
Use1Q9CQ56 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.56□□□□□ -2
Use1Q9CQ56 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.56□□□□□ -2
Use1Q9CQ56 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.56□□□□□ -2
Use1Q9CQ56 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Use1Q9CQ56 Gm26128-201ENSMUST00000083170 110 ntBASIC2.56□□□□□ -2
Use1Q9CQ56 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.56□□□□□ -2
Use1Q9CQ56 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Use1Q9CQ56 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Use1Q9CQ56 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
Use1Q9CQ56 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Use1Q9CQ56 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Use1Q9CQ56 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Use1Q9CQ56 Mir673-201ENSMUST00000102361 91 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 Gm23911-201ENSMUST00000104596 134 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 Gm14915-201ENSMUST00000120747 204 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 Gm14982-201ENSMUST00000121102 442 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.55□□□□□ -2
Use1Q9CQ56 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Use1Q9CQ56 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 Gm23190-201ENSMUST00000180307 64 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 Gm18667-201ENSMUST00000186523 484 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 Gm44555-201ENSMUST00000209008 148 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.55□□□□□ -2
Use1Q9CQ56 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.55□□□□□ -2
Use1Q9CQ56 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.55□□□□□ -2
Use1Q9CQ56 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Use1Q9CQ56 Gm23264-201ENSMUST00000083372 107 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 Gm24446-201ENSMUST00000083982 156 ntBASIC2.55□□□□□ -2
Use1Q9CQ56 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Use1Q9CQ56 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Use1Q9CQ56 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Use1Q9CQ56 Gm25308-201ENSMUST00000104171 158 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Gm22486-201ENSMUST00000116815 137 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Gm14602-201ENSMUST00000118625 340 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Gm16053-201ENSMUST00000120511 188 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.54□□□□□ -2
Use1Q9CQ56 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.54□□□□□ -2
Use1Q9CQ56 Gm24082-201ENSMUST00000175175 83 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Mir7242-201ENSMUST00000183710 79 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Mir6926-201ENSMUST00000184562 68 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Gm37213-201ENSMUST00000193077 586 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Gm45049-201ENSMUST00000207586 591 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.54□□□□□ -2
Use1Q9CQ56 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Gm23102-201ENSMUST00000083724 116 ntBASIC2.54□□□□□ -2
Use1Q9CQ56 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.54□□□□□ -2
Use1Q9CQ56 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.54□□□□□ -2
Use1Q9CQ56 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Use1Q9CQ56 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Use1Q9CQ56 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Use1Q9CQ56 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Use1Q9CQ56 Gm25500-201ENSMUST00000104426 123 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
Use1Q9CQ56 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 DQ267100-201ENSMUST00000122600 72 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Use1Q9CQ56 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.53□□□□□ -2
Use1Q9CQ56 Mir5129-201ENSMUST00000174938 78 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 Gm27608-201ENSMUST00000184822 162 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.53□□□□□ -2
Use1Q9CQ56 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 Gm45438-201ENSMUST00000210242 564 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.53□□□□□ -2
Use1Q9CQ56 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 Gm6030-201ENSMUST00000078768 402 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.53□□□□□ -2
Use1Q9CQ56 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.53□□□□□ -2
Use1Q9CQ56 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Use1Q9CQ56 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Use1Q9CQ56 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Use1Q9CQ56 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Use1Q9CQ56 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm12617-201ENSMUST00000121268 381 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm12693-201ENSMUST00000121965 483 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm24681-201ENSMUST00000158760 107 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm27342-201ENSMUST00000183530 109 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Mir6975-201ENSMUST00000184879 61 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm8392-201ENSMUST00000185647 835 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm43355-201ENSMUST00000196541 346 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm19457-201ENSMUST00000200995 448 ntBASIC2.52□□□□□ -2.01
Use1Q9CQ56 Gm44903-201ENSMUST00000206840 130 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms