Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC5.1□□□□□ -1.59
Trim11Q99PQ2 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Trim11Q99PQ2 Gm26585-201ENSMUST00000180890 630 ntBASIC5.1□□□□□ -1.59
Trim11Q99PQ2 Gm37674-201ENSMUST00000194177 1834 ntBASIC5.1□□□□□ -1.59
Trim11Q99PQ2 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.1□□□□□ -1.59
Trim11Q99PQ2 Gm42623-201ENSMUST00000197225 379 ntBASIC5.1□□□□□ -1.59
Trim11Q99PQ2 Gm43524-201ENSMUST00000197278 298 ntBASIC5.1□□□□□ -1.59
Trim11Q99PQ2 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC5.1□□□□□ -1.59
Trim11Q99PQ2 AC158622.1-201ENSMUST00000217107 230 ntBASIC5.1□□□□□ -1.59
Trim11Q99PQ2 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.1□□□□□ -1.59
Trim11Q99PQ2 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Trim11Q99PQ2 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm12852-201ENSMUST00000119478 719 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm14303-201ENSMUST00000121320 171 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm14768-201ENSMUST00000122126 678 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm5353-201ENSMUST00000139800 793 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm25360-201ENSMUST00000178786 191 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm29352-201ENSMUST00000188054 544 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm30280-201ENSMUST00000192214 262 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Ighv1-6-201ENSMUST00000193849 293 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm43304-201ENSMUST00000196803 326 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm20039-201ENSMUST00000210329 394 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Mir202-201ENSMUST00000083568 72 ntBASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Trim11Q99PQ2 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Trim11Q99PQ2 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Gm22899-201ENSMUST00000104540 131 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Gm11698-201ENSMUST00000117948 455 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Gm2066-201ENSMUST00000118046 389 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Gm12417-201ENSMUST00000119153 403 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Gm10059-201ENSMUST00000131139 171 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Gm21816-201ENSMUST00000179255 360 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Gm4714-201ENSMUST00000203395 279 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Gm7407-201ENSMUST00000208301 568 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Gm38265-201ENSMUST00000193479 3766 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Trim11Q99PQ2 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm23142-201ENSMUST00000101848 105 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm26240-201ENSMUST00000101893 105 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Mir105-201ENSMUST00000104655 80 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm13329-201ENSMUST00000117063 265 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm14861-201ENSMUST00000119451 455 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm11693-201ENSMUST00000119625 565 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm25321-201ENSMUST00000122558 102 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm22145-201ENSMUST00000157396 148 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm22378-201ENSMUST00000157481 111 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm16232-201ENSMUST00000162856 167 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm27421-201ENSMUST00000184729 167 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm8599-201ENSMUST00000193033 457 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm44376-201ENSMUST00000197570 128 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm6303-201ENSMUST00000210123 471 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 AC163357.1-201ENSMUST00000220847 233 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 AC156560.3-201ENSMUST00000222978 3841 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.07□□□□□ -1.6
Trim11Q99PQ2 CT009510.2-203ENSMUST00000226704 2136 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.07□□□□□ -1.6
Trim11Q99PQ2 Gm5670-201ENSMUST00000093546 372 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms