Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CopaQ8CIE6 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CopaQ8CIE6 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.84□□□□□ -1.79
CopaQ8CIE6 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CopaQ8CIE6 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CopaQ8CIE6 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm23697-201ENSMUST00000103897 110 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm13046-201ENSMUST00000117391 501 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm12149-201ENSMUST00000117511 654 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm14119-201ENSMUST00000119511 235 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm23887-201ENSMUST00000122683 172 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm25436-201ENSMUST00000158275 145 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm20542-201ENSMUST00000174582 372 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm24464-201ENSMUST00000179697 107 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Mir6372-201ENSMUST00000185114 109 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm8600-201ENSMUST00000186320 905 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm28299-201ENSMUST00000189908 339 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm44391-201ENSMUST00000198490 93 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm44266-201ENSMUST00000205235 500 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.84□□□□□ -1.79
CopaQ8CIE6 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm45162-201ENSMUST00000209013 618 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Gm45387-201ENSMUST00000209792 632 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.84□□□□□ -1.79
CopaQ8CIE6 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.84□□□□□ -1.79
CopaQ8CIE6 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CopaQ8CIE6 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CopaQ8CIE6 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.84□□□□□ -1.8
CopaQ8CIE6 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
CopaQ8CIE6 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm11566-201ENSMUST00000118550 203 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm15799-201ENSMUST00000120899 289 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm14765-201ENSMUST00000121954 326 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm14564-201ENSMUST00000122159 294 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm15899-201ENSMUST00000128586 238 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm23084-201ENSMUST00000157850 114 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm24534-201ENSMUST00000157949 291 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm24930-201ENSMUST00000158315 83 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm22531-201ENSMUST00000158819 140 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm21758-201ENSMUST00000179336 819 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm22633-201ENSMUST00000179834 107 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm27828-201ENSMUST00000184108 119 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm20832-201ENSMUST00000189076 665 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm28241-201ENSMUST00000190916 235 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm18964-201ENSMUST00000193013 563 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm31511-201ENSMUST00000193134 657 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm37353-201ENSMUST00000194497 313 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm8747-201ENSMUST00000195392 751 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm30638-201ENSMUST00000195570 656 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm36728-201ENSMUST00000195782 665 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm5034-201ENSMUST00000199115 634 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm43578-201ENSMUST00000201250 459 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm7039-201ENSMUST00000205138 346 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm45438-201ENSMUST00000210242 564 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm18696-201ENSMUST00000220103 274 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm24950-201ENSMUST00000082768 191 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm23518-201ENSMUST00000082835 153 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm26055-201ENSMUST00000083038 107 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm23242-201ENSMUST00000083055 107 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm23971-201ENSMUST00000083317 191 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm23849-201ENSMUST00000083833 191 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm26316-201ENSMUST00000083886 191 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.83□□□□□ -1.8
CopaQ8CIE6 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CopaQ8CIE6 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CopaQ8CIE6 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CopaQ8CIE6 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CopaQ8CIE6 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.82□□□□□ -1.8
CopaQ8CIE6 Gm26273-201ENSMUST00000104180 131 ntBASIC3.82□□□□□ -1.8
CopaQ8CIE6 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.82□□□□□ -1.8
CopaQ8CIE6 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CopaQ8CIE6 Gm27189-201ENSMUST00000184119 190 ntBASIC3.82□□□□□ -1.8
CopaQ8CIE6 Mir6385-201ENSMUST00000184295 105 ntBASIC3.82□□□□□ -1.8
CopaQ8CIE6 Mir6363-201ENSMUST00000184880 114 ntBASIC3.82□□□□□ -1.8
CopaQ8CIE6 Gm18291-201ENSMUST00000190791 301 ntBASIC3.82□□□□□ -1.8
CopaQ8CIE6 Gm8242-202ENSMUST00000193056 475 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms