Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Atg4aQ8C9S8 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Atg4aQ8C9S8 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm24127-201ENSMUST00000104110 130 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm24890-201ENSMUST00000104389 102 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm13504-201ENSMUST00000117490 316 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm9078-201ENSMUST00000119126 617 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm13482-201ENSMUST00000119842 254 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm14785-201ENSMUST00000120185 539 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm13743-201ENSMUST00000121486 724 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm23118-201ENSMUST00000122657 187 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm23312-201ENSMUST00000158774 102 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm25748-201ENSMUST00000175487 70 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm26585-201ENSMUST00000180890 630 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm28666-201ENSMUST00000186649 274 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm43407-201ENSMUST00000199816 317 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm18488-201ENSMUST00000215082 364 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm37598-201ENSMUST00000194506 1301 ntBASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Atg4aQ8C9S8 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm12509-201ENSMUST00000118033 609 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm11625-201ENSMUST00000119535 296 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm11359-201ENSMUST00000120039 567 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm14815-201ENSMUST00000120060 488 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm26187-201ENSMUST00000157693 101 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Mir5098-201ENSMUST00000175320 82 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm25194-201ENSMUST00000177987 79 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm8649-201ENSMUST00000181799 233 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm29413-201ENSMUST00000186019 880 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm29452-201ENSMUST00000187996 313 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm28860-201ENSMUST00000188103 313 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm29639-201ENSMUST00000188375 580 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm18403-201ENSMUST00000192907 529 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm45316-201ENSMUST00000210128 162 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm2628-201ENSMUST00000218019 426 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Atg4aQ8C9S8 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm25466-201ENSMUST00000103995 132 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm25308-201ENSMUST00000104171 158 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm3940-201ENSMUST00000105087 432 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm15177-201ENSMUST00000120491 577 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm9613-201ENSMUST00000171662 196 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm26194-201ENSMUST00000175036 71 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm24315-201ENSMUST00000177835 127 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Mir496b-201ENSMUST00000184935 113 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm27700-201ENSMUST00000185003 81 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm28343-201ENSMUST00000185386 112 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm43550-201ENSMUST00000200597 303 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm44030-201ENSMUST00000204865 432 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm2446-201ENSMUST00000220144 772 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Gm10038-201ENSMUST00000077233 441 ntBASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Atg4aQ8C9S8 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Mir667-201ENSMUST00000102441 92 ntBASIC3.55□□□□□ -1.84
Atg4aQ8C9S8 Gm22939-201ENSMUST00000103958 131 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms