Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm25796-201ENSMUST00000082645 163 ntBASIC2.8□□□□□ -1.96
Usp47Q8BY87 Gm25739-201ENSMUST00000082886 107 ntBASIC2.8□□□□□ -1.96
Usp47Q8BY87 Gm22723-201ENSMUST00000083820 129 ntBASIC2.8□□□□□ -1.96
Usp47Q8BY87 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Usp47Q8BY87 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Usp47Q8BY87 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.8□□□□□ -1.96
Usp47Q8BY87 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Usp47Q8BY87 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm25728-201ENSMUST00000104525 159 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm23109-201ENSMUST00000116867 126 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm24885-201ENSMUST00000158783 270 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm8292-201ENSMUST00000162574 396 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm27155-201ENSMUST00000183716 898 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm29597-201ENSMUST00000188035 308 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm37037-201ENSMUST00000194475 424 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm44181-201ENSMUST00000203106 483 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm45034-201ENSMUST00000206831 482 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm45240-201ENSMUST00000211437 674 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Usp47Q8BY87 Gm25813-201ENSMUST00000082748 191 ntBASIC2.79□□□□□ -1.96
Usp47Q8BY87 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Usp47Q8BY87 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usp47Q8BY87 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Usp47Q8BY87 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Usp47Q8BY87 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usp47Q8BY87 Gm12935-201ENSMUST00000119352 246 ntBASIC2.78□□□□□ -1.96
Usp47Q8BY87 Gm16373-201ENSMUST00000129517 303 ntBASIC2.78□□□□□ -1.96
Usp47Q8BY87 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.78□□□□□ -1.96
Usp47Q8BY87 Gm16147-201ENSMUST00000162143 373 ntBASIC2.78□□□□□ -1.96
Usp47Q8BY87 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.78□□□□□ -1.96
Usp47Q8BY87 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.78□□□□□ -1.96
Usp47Q8BY87 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.78□□□□□ -1.96
Usp47Q8BY87 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.78□□□□□ -1.96
Usp47Q8BY87 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usp47Q8BY87 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
Usp47Q8BY87 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
Usp47Q8BY87 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Usp47Q8BY87 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
Usp47Q8BY87 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 Mir542-201ENSMUST00000102186 85 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm22072-201ENSMUST00000116850 121 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm15162-201ENSMUST00000119325 283 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm22208-201ENSMUST00000122658 110 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm25488-201ENSMUST00000158728 118 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm2092-201ENSMUST00000178887 639 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm2759-201ENSMUST00000179938 639 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.77□□□□□ -1.97
Usp47Q8BY87 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Usp47Q8BY87 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Usp47Q8BY87 Gm12509-201ENSMUST00000118033 609 ntBASIC2.76□□□□□ -1.97
Usp47Q8BY87 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.76□□□□□ -1.97
Usp47Q8BY87 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.76□□□□□ -1.97
Usp47Q8BY87 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Usp47Q8BY87 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.76□□□□□ -1.97
Usp47Q8BY87 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Usp47Q8BY87 Gm20776-201ENSMUST00000189940 700 ntBASIC2.76□□□□□ -1.97
Usp47Q8BY87 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC2.76□□□□□ -1.97
Usp47Q8BY87 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.76□□□□□ -1.97
Usp47Q8BY87 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.76□□□□□ -1.97
Usp47Q8BY87 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Usp47Q8BY87 Gm22829-201ENSMUST00000083771 106 ntBASIC2.76□□□□□ -1.97
Usp47Q8BY87 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.76□□□□□ -1.97
Usp47Q8BY87 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Usp47Q8BY87 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm12492-201ENSMUST00000117665 564 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm15116-201ENSMUST00000122248 663 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm7592-201ENSMUST00000160674 627 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.75□□□□□ -1.97
Usp47Q8BY87 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm26915-201ENSMUST00000183080 748 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm27979-201ENSMUST00000185126 56 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm18727-201ENSMUST00000185981 553 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm28745-201ENSMUST00000190069 305 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm3489-201ENSMUST00000190083 528 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Gm19244-201ENSMUST00000204340 253 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC2.75□□□□□ -1.97
Usp47Q8BY87 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms