Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm15387-201ENSMUST00000120421 648 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm22960-201ENSMUST00000122517 104 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm23168-201ENSMUST00000157156 143 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm25365-201ENSMUST00000158852 121 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm22716-201ENSMUST00000177596 107 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm8649-201ENSMUST00000181799 233 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm17966-201ENSMUST00000193453 594 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.15□□□□□ -1.59
Usp40Q8BWR4 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm25699-201ENSMUST00000082896 167 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Mir101b-201ENSMUST00000083622 97 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm5518-201ENSMUST00000084171 648 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
Usp40Q8BWR4 Gm37747-201ENSMUST00000193717 4003 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm13880-201ENSMUST00000118421 474 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm15493-201ENSMUST00000119461 528 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm12512-201ENSMUST00000119620 217 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm15267-201ENSMUST00000120888 464 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm23753-201ENSMUST00000157575 149 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm28781-201ENSMUST00000185760 696 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm28263-201ENSMUST00000185884 400 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm29307-201ENSMUST00000187367 696 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm29339-201ENSMUST00000189613 696 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm29407-201ENSMUST00000191468 696 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm29754-201ENSMUST00000206269 358 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm17989-201ENSMUST00000211543 412 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.14□□□□□ -1.59
Usp40Q8BWR4 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 n-R5s182-201ENSMUST00000083889 107 ntBASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
Usp40Q8BWR4 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm12722-201ENSMUST00000118507 493 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm15147-201ENSMUST00000122263 483 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm6956-201ENSMUST00000134724 546 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm26101-201ENSMUST00000157246 105 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm24976-201ENSMUST00000158972 135 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm6486-201ENSMUST00000166202 434 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Snora15-201ENSMUST00000177461 131 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm26430-201ENSMUST00000178054 107 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm7958-201ENSMUST00000178255 468 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm7950-201ENSMUST00000179633 468 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm28283-201ENSMUST00000185509 178 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm28506-201ENSMUST00000189937 150 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm8939-201ENSMUST00000192577 964 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm32447-201ENSMUST00000194265 697 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 AC171206.2-201ENSMUST00000215252 389 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 AC158523.1-201ENSMUST00000221398 328 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm23733-201ENSMUST00000083750 106 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
Usp40Q8BWR4 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm14125-201ENSMUST00000113442 680 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm24640-201ENSMUST00000116949 126 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm22626-201ENSMUST00000116990 126 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm11448-201ENSMUST00000120427 450 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm22514-201ENSMUST00000122547 308 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm22482-201ENSMUST00000122563 359 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm23213-201ENSMUST00000122715 313 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm23277-201ENSMUST00000157914 136 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Gm25860-201ENSMUST00000158252 126 ntBASIC5.12□□□□□ -1.59
Usp40Q8BWR4 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms