Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm12016-201ENSMUST00000119079 681 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm12095-201ENSMUST00000121962 816 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm25979-201ENSMUST00000157177 138 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm22794-201ENSMUST00000157228 306 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21842-201ENSMUST00000177552 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21626-201ENSMUST00000177791 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21562-201ENSMUST00000177888 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21539-201ENSMUST00000177925 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm17522-201ENSMUST00000178144 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21599-201ENSMUST00000178249 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21914-201ENSMUST00000178452 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21723-201ENSMUST00000178692 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21916-201ENSMUST00000178771 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21801-201ENSMUST00000178865 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm22367-201ENSMUST00000178930 132 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21633-201ENSMUST00000178941 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21821-201ENSMUST00000179646 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21588-201ENSMUST00000180074 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21780-201ENSMUST00000180128 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21572-201ENSMUST00000180134 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm21529-201ENSMUST00000180175 498 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm26928-201ENSMUST00000182674 572 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Mir6408-201ENSMUST00000183643 91 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm29370-202ENSMUST00000187476 499 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm28802-201ENSMUST00000188624 944 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm43393-201ENSMUST00000200147 194 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm19649-201ENSMUST00000201126 822 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm23297-201ENSMUST00000083184 127 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm24610-201ENSMUST00000083270 109 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.08□□□□□ -1.92
Ccdc40Q8BI79 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm14751-201ENSMUST00000117693 222 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm14651-201ENSMUST00000147192 442 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm16111-201ENSMUST00000162128 285 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm26195-201ENSMUST00000175035 101 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm27783-201ENSMUST00000183534 105 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm7870-201ENSMUST00000184467 616 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm28628-201ENSMUST00000187006 264 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm28629-201ENSMUST00000187309 263 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm29600-201ENSMUST00000188687 377 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm17893-201ENSMUST00000203017 770 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm44954-201ENSMUST00000208513 227 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm19709-201ENSMUST00000215403 482 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm25008-201ENSMUST00000083809 81 ntBASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc40Q8BI79 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm14101-201ENSMUST00000121502 473 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm12693-201ENSMUST00000121965 483 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm14564-201ENSMUST00000122159 294 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm25637-201ENSMUST00000157529 107 ntBASIC3.06□□□□□ -1.92
Ccdc40Q8BI79 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms