Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AC116460.1-201ENSMUST00000219040 313 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm10237-201ENSMUST00000078393 273 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Mir669i-201ENSMUST00000117007 127 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm28781-201ENSMUST00000185760 696 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm29307-201ENSMUST00000187367 696 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm29339-201ENSMUST00000189613 696 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm29407-201ENSMUST00000191468 696 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm19366-201ENSMUST00000206996 156 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm45317-201ENSMUST00000210385 223 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 mt-Td-201ENSMUST00000082404 70 ntBASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ddx55Q6ZPL9 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm12982-201ENSMUST00000117408 190 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm14765-201ENSMUST00000121954 326 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm4916-201ENSMUST00000126139 642 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm21726-201ENSMUST00000179654 392 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm24464-201ENSMUST00000179697 107 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm28299-201ENSMUST00000189908 339 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm44349-201ENSMUST00000197048 123 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm43624-201ENSMUST00000197368 180 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Crs-ps-201ENSMUST00000203723 760 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm9712-201ENSMUST00000210842 311 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm45327-201ENSMUST00000211612 565 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm8249-201ENSMUST00000219225 465 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm8274-201ENSMUST00000219820 463 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 CT025602.1-201ENSMUST00000227281 382 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm22977-201ENSMUST00000082615 107 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm23297-201ENSMUST00000083184 127 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Snord15a-201ENSMUST00000083888 148 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ddx55Q6ZPL9 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm23577-201ENSMUST00000103950 110 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm13831-201ENSMUST00000118764 302 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm12156-201ENSMUST00000119188 554 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm14875-201ENSMUST00000120881 319 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm12412-201ENSMUST00000121867 328 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm5123-201ENSMUST00000121905 837 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm6969-201ENSMUST00000140065 342 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm5755-201ENSMUST00000152394 837 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm23755-201ENSMUST00000157578 343 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm4479-201ENSMUST00000178807 171 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm29610-201ENSMUST00000187749 453 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm26449-201ENSMUST00000082452 104 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm24611-201ENSMUST00000083272 107 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm25630-201ENSMUST00000084000 162 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Gm5670-201ENSMUST00000093546 372 ntBASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ddx55Q6ZPL9 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms