Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Smarca1Q6PGB8 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Smarca1Q6PGB8 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm14518-201ENSMUST00000117351 542 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm8217-201ENSMUST00000119136 465 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm24190-201ENSMUST00000157976 216 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm25519-201ENSMUST00000158392 127 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm24876-201ENSMUST00000158780 92 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm23152-201ENSMUST00000175322 116 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm20612-201ENSMUST00000176318 236 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm24315-201ENSMUST00000177835 127 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm27249-201ENSMUST00000185049 328 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm29330-201ENSMUST00000190032 699 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm29192-201ENSMUST00000190942 377 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm28098-201ENSMUST00000191361 699 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm44391-201ENSMUST00000198490 93 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm18921-201ENSMUST00000221798 366 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm2710-201ENSMUST00000073196 603 ntBASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
Smarca1Q6PGB8 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm12902-201ENSMUST00000118389 322 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm12722-201ENSMUST00000118507 493 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm14694-201ENSMUST00000121856 282 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm23981-201ENSMUST00000157136 106 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm25621-201ENSMUST00000157223 114 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm24061-201ENSMUST00000157489 120 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm23078-201ENSMUST00000157848 148 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm23022-201ENSMUST00000158768 180 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm26195-201ENSMUST00000175035 101 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm25198-201ENSMUST00000178574 110 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm27028-201ENSMUST00000182303 399 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Mir7062-201ENSMUST00000185038 66 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm44923-201ENSMUST00000206673 85 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm44609-201ENSMUST00000207157 460 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 AC157654.1-201ENSMUST00000224130 820 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm23645-201ENSMUST00000083228 108 ntBASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Smarca1Q6PGB8 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm14825-201ENSMUST00000113538 701 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm12125-201ENSMUST00000117261 736 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm12156-201ENSMUST00000119188 554 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm13692-201ENSMUST00000120774 371 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm14411-201ENSMUST00000121798 914 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm22521-201ENSMUST00000158272 134 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm4479-201ENSMUST00000178807 171 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm37337-201ENSMUST00000192601 993 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm37757-201ENSMUST00000193072 210 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm9379-201ENSMUST00000196790 646 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm42621-201ENSMUST00000198114 275 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm7946-201ENSMUST00000203326 958 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm22508-201ENSMUST00000082772 110 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Smarca1Q6PGB8 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms