Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm26189-201ENSMUST00000179879 107 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm27585-201ENSMUST00000183717 199 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm29014-201ENSMUST00000191422 326 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm38060-201ENSMUST00000194822 464 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Mir6994-201ENSMUST00000198985 73 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm44720-201ENSMUST00000206076 260 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm26497-201ENSMUST00000083146 107 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm23455-201ENSMUST00000083331 100 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm23594-201ENSMUST00000104307 134 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm23322-201ENSMUST00000104464 167 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm11576-201ENSMUST00000117433 417 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm13876-201ENSMUST00000118451 261 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm11909-201ENSMUST00000121424 759 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm6969-201ENSMUST00000140065 342 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm22849-201ENSMUST00000157713 307 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm25360-201ENSMUST00000178786 191 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Mir7022-201ENSMUST00000183749 61 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm29320-201ENSMUST00000185235 615 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm29179-202ENSMUST00000186138 615 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm29448-201ENSMUST00000186675 615 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm29314-201ENSMUST00000186800 615 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm28253-202ENSMUST00000187971 615 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm29169-201ENSMUST00000189835 615 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm7041-201ENSMUST00000201227 524 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm32308-201ENSMUST00000203053 280 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm45007-201ENSMUST00000206237 366 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm45327-201ENSMUST00000211612 565 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 AC140477.1-201ENSMUST00000222354 246 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm8074-201ENSMUST00000095071 252 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.29□□□□□ -1.72
Scaf4Q6PFF0 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 AC133079.1-201ENSMUST00000220943 1881 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm23422-201ENSMUST00000102000 107 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm15297-201ENSMUST00000117795 290 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm14868-201ENSMUST00000117840 216 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm13153-201ENSMUST00000120969 637 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm8880-201ENSMUST00000121800 454 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm23959-201ENSMUST00000157208 324 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm25624-201ENSMUST00000157222 275 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm22433-201ENSMUST00000158550 142 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm26318-201ENSMUST00000176507 96 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm26928-201ENSMUST00000182674 572 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm27543-201ENSMUST00000183562 177 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm27997-201ENSMUST00000184942 69 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm29352-201ENSMUST00000188054 544 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm28924-201ENSMUST00000190012 241 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm37801-201ENSMUST00000194754 274 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm44184-201ENSMUST00000204290 132 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm40692-201ENSMUST00000220411 491 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 AC130829.3-201ENSMUST00000222735 154 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.28□□□□□ -1.72
Scaf4Q6PFF0 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm11432-201ENSMUST00000117334 231 ntBASIC4.27□□□□□ -1.73
Scaf4Q6PFF0 Gm14627-201ENSMUST00000118931 567 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms