Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm13720-201ENSMUST00000120741 196 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm15142-201ENSMUST00000121013 856 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm3370-201ENSMUST00000171785 500 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Mir6382-201ENSMUST00000184055 110 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm28146-201ENSMUST00000185517 701 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm36966-201ENSMUST00000192217 413 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm44393-201ENSMUST00000197418 138 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 LOC667541-201ENSMUST00000223408 278 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 AC130823.2-201ENSMUST00000226169 290 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm7984-201ENSMUST00000060640 538 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm23932-201ENSMUST00000082914 107 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Mir19a-201ENSMUST00000083482 82 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm23503-201ENSMUST00000083903 107 ntBASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Hmgb4Q6P8W9 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm14751-201ENSMUST00000117693 222 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm12156-201ENSMUST00000119188 554 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm11891-201ENSMUST00000121241 619 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm28437-201ENSMUST00000190277 783 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm43556-201ENSMUST00000196186 681 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm44208-201ENSMUST00000205199 421 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm45192-201ENSMUST00000206749 283 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm45023-201ENSMUST00000207951 379 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm26206-201ENSMUST00000082908 110 ntBASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Hmgb4Q6P8W9 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Hmgb4Q6P8W9 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.34□□□□□ -1.88
Hmgb4Q6P8W9 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Hmgb4Q6P8W9 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm11577-201ENSMUST00000118030 737 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm12640-201ENSMUST00000120097 310 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm13751-201ENSMUST00000120280 752 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm15190-201ENSMUST00000120855 276 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm12819-201ENSMUST00000122223 629 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm22516-201ENSMUST00000158266 124 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Nron-204ENSMUST00000158971 370 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm29641-201ENSMUST00000188955 259 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm18956-201ENSMUST00000192857 480 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm18414-201ENSMUST00000210858 694 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm20304-201ENSMUST00000218168 444 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm4017-201ENSMUST00000084813 338 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.33□□□□□ -1.88
Hmgb4Q6P8W9 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm24119-201ENSMUST00000103979 246 ntBASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm14793-201ENSMUST00000118739 311 ntBASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm14887-201ENSMUST00000119522 663 ntBASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm16021-201ENSMUST00000121176 219 ntBASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm13356-201ENSMUST00000121678 335 ntBASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm23212-201ENSMUST00000122718 60 ntBASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm25341-201ENSMUST00000157461 268 ntBASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Gm24061-201ENSMUST00000157489 120 ntBASIC3.32□□□□□ -1.88
Hmgb4Q6P8W9 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms