Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm13717-201ENSMUST00000119868 365 ntBASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm23325-201ENSMUST00000157422 129 ntBASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm22538-201ENSMUST00000158169 299 ntBASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm22766-201ENSMUST00000158372 99 ntBASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm22853-201ENSMUST00000174974 131 ntBASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm29658-201ENSMUST00000185404 230 ntBASIC3.43□□□□□ -1.86
Ctr9Q62018 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm29817-201ENSMUST00000210098 172 ntBASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.43□□□□□ -1.86
Ctr9Q62018 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm22249-201ENSMUST00000082485 136 ntBASIC3.43□□□□□ -1.86
Ctr9Q62018 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.43□□□□□ -1.86
Ctr9Q62018 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.43□□□□□ -1.86
Ctr9Q62018 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Ctr9Q62018 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm24951-201ENSMUST00000102182 109 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm12935-201ENSMUST00000119352 246 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm15878-201ENSMUST00000127561 306 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm22141-201ENSMUST00000157403 277 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm25334-201ENSMUST00000158036 110 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm26271-201ENSMUST00000158349 104 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm21893-201ENSMUST00000179119 397 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm27796-201ENSMUST00000183863 261 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm18448-201ENSMUST00000186286 599 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm29365-201ENSMUST00000189461 699 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm35212-201ENSMUST00000196672 606 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm43407-201ENSMUST00000199816 317 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm44212-201ENSMUST00000205016 897 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm45380-201ENSMUST00000210465 315 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm46136-201ENSMUST00000214730 565 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Ctr9Q62018 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ctr9Q62018 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.42□□□□□ -1.86
Ctr9Q62018 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ctr9Q62018 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ctr9Q62018 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ctr9Q62018 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm24120-201ENSMUST00000103978 129 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm25466-201ENSMUST00000103995 132 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm14971-201ENSMUST00000117980 663 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm15231-201ENSMUST00000119174 447 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm12213-201ENSMUST00000119924 353 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm2005-201ENSMUST00000120759 542 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm11456-201ENSMUST00000121070 256 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.41□□□□□ -1.86
Ctr9Q62018 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ctr9Q62018 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm17929-201ENSMUST00000186851 627 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm28628-201ENSMUST00000187006 264 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm28629-201ENSMUST00000187309 263 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm43043-201ENSMUST00000196579 412 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm44254-201ENSMUST00000204184 322 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.41□□□□□ -1.86
Ctr9Q62018 AC156795.1-201ENSMUST00000214655 414 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
Ctr9Q62018 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 AC154484.1-201ENSMUST00000227311 771 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 AC132918.1-201ENSMUST00000227877 925 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm24622-201ENSMUST00000082619 162 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm24921-201ENSMUST00000083024 107 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Mir21a-201ENSMUST00000083521 92 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ctr9Q62018 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.41□□□□□ -1.86
Ctr9Q62018 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ctr9Q62018 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ctr9Q62018 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ctr9Q62018 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ctr9Q62018 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.4□□□□□ -1.86
Ctr9Q62018 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ctr9Q62018 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Ctr9Q62018 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ctr9Q62018 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ctr9Q62018 Mir667-201ENSMUST00000102441 92 ntBASIC3.4□□□□□ -1.87
Ctr9Q62018 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.4□□□□□ -1.87
Ctr9Q62018 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms