Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm14506-201ENSMUST00000121165 536 ntBASIC2.69□□□□□ -1.98
Usf1Q61069 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.69□□□□□ -1.98
Usf1Q61069 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.69□□□□□ -1.98
Usf1Q61069 Gm17183-201ENSMUST00000171170 493 ntBASIC2.69□□□□□ -1.98
Usf1Q61069 Gm20415-201ENSMUST00000172877 423 ntBASIC2.69□□□□□ -1.98
Usf1Q61069 Gm28002-201ENSMUST00000184832 100 ntBASIC2.69□□□□□ -1.98
Usf1Q61069 Gm18433-202ENSMUST00000195682 196 ntBASIC2.69□□□□□ -1.98
Usf1Q61069 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.69□□□□□ -1.98
Usf1Q61069 Gm19177-201ENSMUST00000204520 613 ntBASIC2.69□□□□□ -1.98
Usf1Q61069 Gm45439-201ENSMUST00000211723 359 ntBASIC2.69□□□□□ -1.98
Usf1Q61069 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.69□□□□□ -1.98
Usf1Q61069 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.69□□□□□ -1.98
Usf1Q61069 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.69□□□□□ -1.98
Usf1Q61069 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.69□□□□□ -1.98
Usf1Q61069 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Usf1Q61069 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Usf1Q61069 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Usf1Q61069 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Usf1Q61069 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Usf1Q61069 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Usf1Q61069 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Usf1Q61069 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Usf1Q61069 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Usf1Q61069 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Gm13717-201ENSMUST00000119868 365 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Gm12640-201ENSMUST00000120097 310 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Gm12607-201ENSMUST00000120724 493 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.68□□□□□ -1.98
Usf1Q61069 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.68□□□□□ -1.98
Usf1Q61069 Gm28637-201ENSMUST00000179424 345 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.68□□□□□ -1.98
Usf1Q61069 Gm27599-201ENSMUST00000183758 174 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Gm6651-201ENSMUST00000189471 271 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Usf1Q61069 Gm21489-201ENSMUST00000189668 818 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Gm45588-201ENSMUST00000211213 630 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Gm18729-201ENSMUST00000217230 621 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Usf1Q61069 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Usf1Q61069 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Usf1Q61069 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Usf1Q61069 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Usf1Q61069 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.68□□□□□ -1.98
Usf1Q61069 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Usf1Q61069 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Usf1Q61069 Mir693-201ENSMUST00000102187 89 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm25485-201ENSMUST00000104120 132 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm23128-201ENSMUST00000104257 132 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm24890-201ENSMUST00000104389 102 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.67□□□□□ -1.98
Usf1Q61069 Gm26247-201ENSMUST00000116702 91 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm13627-201ENSMUST00000119700 706 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.67□□□□□ -1.98
Usf1Q61069 Gm14651-201ENSMUST00000147192 442 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm24922-201ENSMUST00000158511 102 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Mir5118-201ENSMUST00000175551 67 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Mir5136-201ENSMUST00000175573 76 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm27161-201ENSMUST00000183960 562 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Mir6383-201ENSMUST00000184545 116 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.67□□□□□ -1.98
Usf1Q61069 Gm28412-201ENSMUST00000187243 177 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm29330-201ENSMUST00000190032 699 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm28098-201ENSMUST00000191361 699 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.67□□□□□ -1.98
Usf1Q61069 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm23128-202ENSMUST00000196578 133 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm29754-201ENSMUST00000206269 358 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Usf1Q61069 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Usf1Q61069 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Usf1Q61069 Gm25131-201ENSMUST00000082653 151 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm25008-201ENSMUST00000083809 81 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Usf1Q61069 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Usf1Q61069 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Usf1Q61069 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.67□□□□□ -1.98
Usf1Q61069 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Usf1Q61069 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Usf1Q61069 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Usf1Q61069 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Usf1Q61069 Gm24671-201ENSMUST00000104159 158 ntBASIC2.66□□□□□ -1.98
Usf1Q61069 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.66□□□□□ -1.98
Usf1Q61069 Gm14713-201ENSMUST00000122362 686 ntBASIC2.66□□□□□ -1.98
Usf1Q61069 Gm24914-201ENSMUST00000157285 313 ntBASIC2.66□□□□□ -1.98
Usf1Q61069 Gm24879-201ENSMUST00000158386 143 ntBASIC2.66□□□□□ -1.98
Usf1Q61069 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.66□□□□□ -1.98
Usf1Q61069 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Usf1Q61069 Gm44208-201ENSMUST00000205199 421 ntBASIC2.66□□□□□ -1.98
Usf1Q61069 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.66□□□□□ -1.98
Usf1Q61069 Gm7675-201ENSMUST00000208828 686 ntBASIC2.66□□□□□ -1.98
Usf1Q61069 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.66□□□□□ -1.98
Usf1Q61069 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.66□□□□□ -1.98
Usf1Q61069 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.66□□□□□ -1.98
Usf1Q61069 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms