Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Gm14825-201ENSMUST00000113538 701 ntBASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Gm12785-201ENSMUST00000122052 172 ntBASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Gm22789-201ENSMUST00000157884 130 ntBASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Gm22389-201ENSMUST00000158193 301 ntBASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Gm20698-201ENSMUST00000175657 233 ntBASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Mir6899-201ENSMUST00000184798 64 ntBASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Gm43955-201ENSMUST00000204332 142 ntBASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 CR974429.1-201ENSMUST00000220877 827 ntBASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Snord14e-201ENSMUST00000082857 90 ntBASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Gm42639-201ENSMUST00000197061 1871 ntBASIC6.26□□□□□ -1.41
Scaf1Q5U4C3 Gm37848-201ENSMUST00000195288 3103 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm14878-201ENSMUST00000118167 293 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm14861-201ENSMUST00000119451 455 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm12884-201ENSMUST00000120371 325 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm13903-201ENSMUST00000120945 193 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm22107-201ENSMUST00000122548 100 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm23781-201ENSMUST00000157940 308 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm27402-201ENSMUST00000183890 120 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm9379-201ENSMUST00000196790 646 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm19177-201ENSMUST00000204520 613 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm23099-201ENSMUST00000083454 139 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm37764-201ENSMUST00000194664 2150 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scaf1Q5U4C3 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Gm12893-201ENSMUST00000121732 275 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Gm14298-201ENSMUST00000139032 237 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Gm16356-201ENSMUST00000143300 169 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Gm24729-201ENSMUST00000158225 137 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Gm22621-201ENSMUST00000179678 74 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Mir6975-201ENSMUST00000184879 61 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Gm37431-201ENSMUST00000195102 111 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Gm18258-201ENSMUST00000210413 542 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 AC164297.3-201ENSMUST00000224238 94 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 CT485608.1-201ENSMUST00000228759 389 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Gm25140-201ENSMUST00000083254 140 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Gm45137-201ENSMUST00000208652 4415 ntBASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scaf1Q5U4C3 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm37099-201ENSMUST00000191902 3451 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm7312-201ENSMUST00000118798 469 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm26256-201ENSMUST00000122499 186 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm12238-201ENSMUST00000127764 124 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm16354-201ENSMUST00000155376 150 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm23960-201ENSMUST00000157206 131 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm15796-201ENSMUST00000162135 204 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm27165-201ENSMUST00000183951 232 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm17951-201ENSMUST00000198536 496 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm43529-201ENSMUST00000199178 412 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm43424-201ENSMUST00000200484 253 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm7041-201ENSMUST00000201227 524 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm45315-201ENSMUST00000209283 333 ntBASIC6.23□□□□□ -1.41
Scaf1Q5U4C3 Gm45513-201ENSMUST00000210228 376 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms