Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm23467-201ENSMUST00000157127 159 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Gm23268-201ENSMUST00000175494 78 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Gm8502-201ENSMUST00000185708 901 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Gm28163-201ENSMUST00000187099 325 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Gm18775-201ENSMUST00000190763 586 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Gm38076-201ENSMUST00000193889 450 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Gm42465-201ENSMUST00000197036 492 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 AC132433.1-201ENSMUST00000221553 1101 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 AC158392.1-201ENSMUST00000223720 1069 ntBASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.34□□□□□ -2.19
Trav3-1Q5R1I8 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.34□□□□□ -2.2
Trav3-1Q5R1I8 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm13806-201ENSMUST00000117822 325 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm12787-201ENSMUST00000119234 396 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm24190-201ENSMUST00000157976 216 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm15946-201ENSMUST00000160654 423 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm27849-201ENSMUST00000183673 125 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm27611-201ENSMUST00000184690 108 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm27544-201ENSMUST00000185069 155 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Mir129b-201ENSMUST00000197461 65 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm44794-201ENSMUST00000206550 411 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm44657-201ENSMUST00000208568 450 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Gm19232-201ENSMUST00000211621 652 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 AC154562.1-201ENSMUST00000226140 966 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Mir132-201ENSMUST00000083603 66 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 AC169038.1-201ENSMUST00000227378 1352 ntBASIC1.33□□□□□ -2.2
Trav3-1Q5R1I8 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 AC154386.1-201ENSMUST00000222753 2871 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm11252-201ENSMUST00000120572 939 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm22517-201ENSMUST00000158265 136 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm25488-201ENSMUST00000158728 118 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm23005-201ENSMUST00000158950 136 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm24656-201ENSMUST00000177548 132 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm26864-201ENSMUST00000181346 156 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm7634-201ENSMUST00000185778 553 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm29603-201ENSMUST00000186792 334 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm29641-201ENSMUST00000188955 259 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm43708-201ENSMUST00000198857 961 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Gm29815-201ENSMUST00000202418 178 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 AC093926.1-201ENSMUST00000213730 243 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 CT009765.2-201ENSMUST00000221331 392 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 AC129202.3-201ENSMUST00000224413 733 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Vmn1r89-206ENSMUST00000227319 985 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 n-R5s86-201ENSMUST00000083215 119 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Mir300-201ENSMUST00000083485 79 ntBASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Trav3-1Q5R1I8 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Trav3-1Q5R1I8 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Trav3-1Q5R1I8 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.31□□□□□ -2.2
Trav3-1Q5R1I8 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
Trav3-1Q5R1I8 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Trav3-1Q5R1I8 Gm25992-201ENSMUST00000102437 109 ntBASIC1.31□□□□□ -2.2
Trav3-1Q5R1I8 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trav3-1Q5R1I8 Gm15846-201ENSMUST00000116022 320 ntBASIC1.31□□□□□ -2.2
Trav3-1Q5R1I8 Gm14868-201ENSMUST00000117840 216 ntBASIC1.31□□□□□ -2.2
Trav3-1Q5R1I8 Gm14411-201ENSMUST00000121798 914 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms