Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm23691-201ENSMUST00000101878 107 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm13603-201ENSMUST00000119404 83 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm11430-201ENSMUST00000121317 217 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm14363-201ENSMUST00000122304 409 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm25945-201ENSMUST00000122484 135 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm26020-201ENSMUST00000122729 183 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm23754-201ENSMUST00000157576 63 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm25427-201ENSMUST00000157605 103 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm17119-201ENSMUST00000163943 280 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm27861-201ENSMUST00000183920 214 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm29045-201ENSMUST00000187278 698 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm43355-201ENSMUST00000196541 346 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm44058-201ENSMUST00000204335 467 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm24147-201ENSMUST00000082763 144 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm22740-201ENSMUST00000083439 109 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Mir137-201ENSMUST00000083635 73 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.03□□□□□ -2.08
Trav7d-4Q5R1H9 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm26504-201ENSMUST00000102033 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm25420-201ENSMUST00000104216 127 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm14879-201ENSMUST00000117308 507 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm6274-201ENSMUST00000118173 797 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm9440-201ENSMUST00000119667 539 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm20415-201ENSMUST00000172877 423 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm26502-201ENSMUST00000177732 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm25350-201ENSMUST00000177849 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm23446-201ENSMUST00000177977 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm26201-201ENSMUST00000178047 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm24711-201ENSMUST00000178062 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm24609-201ENSMUST00000178166 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm23265-201ENSMUST00000178321 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm22812-201ENSMUST00000178329 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm26246-201ENSMUST00000178388 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm25155-201ENSMUST00000178450 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm24760-201ENSMUST00000178530 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm22285-201ENSMUST00000178576 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm22417-201ENSMUST00000178656 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm26270-201ENSMUST00000178690 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm23313-201ENSMUST00000178931 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm23089-201ENSMUST00000178947 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm24153-201ENSMUST00000179280 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm25597-201ENSMUST00000179388 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm25816-201ENSMUST00000179764 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm26188-201ENSMUST00000179963 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm26433-201ENSMUST00000180227 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm22128-201ENSMUST00000180346 94 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Mir8118-201ENSMUST00000183962 129 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm37692-201ENSMUST00000192633 232 ntBASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav7d-4Q5R1H9 Gm31520-201ENSMUST00000203048 733 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms