Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Gm43696-201ENSMUST00000199385 6071 ntBASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Gm24314-201ENSMUST00000158274 123 ntBASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Mirlet7e-201ENSMUST00000196737 93 ntBASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Gm45101-201ENSMUST00000208327 232 ntBASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Gm3086-202ENSMUST00000221248 310 ntBASIC8.32□□□□□ -1.08
Trim41Q5NCC3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim41Q5NCC3 Gm11251-201ENSMUST00000119593 2800 ntBASIC8.31□□□□□ -1.08
Trim41Q5NCC3 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Trim41Q5NCC3 AC159193.1-201ENSMUST00000222872 2517 ntBASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Gm14714-201ENSMUST00000119743 439 ntBASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Gm13132-201ENSMUST00000121194 472 ntBASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Gm24251-201ENSMUST00000157324 114 ntBASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Gm25846-201ENSMUST00000158013 135 ntBASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Gm38076-201ENSMUST00000193889 450 ntBASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC8.31□□□□□ -1.08
Trim41Q5NCC3 AC164297.3-201ENSMUST00000224238 94 ntBASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim41Q5NCC3 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Gm15896-201ENSMUST00000118045 440 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Gm12458-201ENSMUST00000119387 495 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Gm12495-201ENSMUST00000119750 447 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Gm42578-201ENSMUST00000199960 194 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Gm44583-201ENSMUST00000207478 281 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 AC156798.1-201ENSMUST00000220508 224 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Gm24616-201ENSMUST00000083274 139 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Gm37099-201ENSMUST00000191902 3451 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Gm43312-201ENSMUST00000201655 2466 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 AC154573.1-201ENSMUST00000225913 4659 ntBASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Trim41Q5NCC3 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm44535-201ENSMUST00000208889 3136 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm2099-202ENSMUST00000223310 3341 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm22590-201ENSMUST00000104247 128 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm22984-201ENSMUST00000122751 122 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm25150-201ENSMUST00000157121 60 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm25386-201ENSMUST00000157814 288 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm22118-201ENSMUST00000175593 171 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm25175-201ENSMUST00000178712 79 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm23922-201ENSMUST00000178792 79 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm24657-201ENSMUST00000180085 79 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm22996-201ENSMUST00000180236 79 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm27805-201ENSMUST00000184513 79 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm43284-201ENSMUST00000200103 253 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm45772-201ENSMUST00000212961 240 ntBASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim41Q5NCC3 Gm43888-201ENSMUST00000204405 2587 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Mir551b-201ENSMUST00000102165 98 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm12704-201ENSMUST00000119789 464 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm26026-201ENSMUST00000122726 123 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm23964-201ENSMUST00000157966 107 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Mir669k-201ENSMUST00000177742 127 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm4479-201ENSMUST00000178807 171 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm25673-201ENSMUST00000179957 127 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm29484-201ENSMUST00000186067 324 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm37763-201ENSMUST00000193445 120 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm32222-201ENSMUST00000203296 298 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm44470-201ENSMUST00000203913 142 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm45007-201ENSMUST00000206237 366 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Mir132-201ENSMUST00000083603 66 ntBASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Trim41Q5NCC3 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
Trim41Q5NCC3 AC113059.2-201ENSMUST00000213462 3016 ntBASIC8.27□□□□□ -1.08
Trim41Q5NCC3 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim41Q5NCC3 Gm25560-201ENSMUST00000104606 176 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms