Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Usp28Q5I043 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Usp28Q5I043 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
Usp28Q5I043 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.83□□□□□ -1.96
Usp28Q5I043 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Usp28Q5I043 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Usp28Q5I043 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
Usp28Q5I043 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.82□□□□□ -1.96
Usp28Q5I043 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Usp28Q5I043 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Usp28Q5I043 Mir667-201ENSMUST00000102441 92 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm15176-201ENSMUST00000117734 135 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm14627-201ENSMUST00000118931 567 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm13210-201ENSMUST00000121483 273 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm15065-201ENSMUST00000121699 273 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm11414-201ENSMUST00000121795 263 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm14651-201ENSMUST00000147192 442 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm22143-201ENSMUST00000157401 203 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm25341-201ENSMUST00000157461 268 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm24198-201ENSMUST00000157812 108 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm24210-201ENSMUST00000158263 133 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm22516-201ENSMUST00000158266 124 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm17154-201ENSMUST00000165748 431 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.82□□□□□ -1.96
Usp28Q5I043 Zfp950-206ENSMUST00000178819 171 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm27428-201ENSMUST00000184289 110 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm29288-201ENSMUST00000191582 901 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm45382-201ENSMUST00000210607 151 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Usp28Q5I043 AF357428-201ENSMUST00000083815 69 ntBASIC2.82□□□□□ -1.96
Usp28Q5I043 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Usp28Q5I043 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm24120-201ENSMUST00000103978 129 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm22497-201ENSMUST00000104499 131 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm14932-201ENSMUST00000117112 453 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm12636-201ENSMUST00000117395 624 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm12607-201ENSMUST00000120724 493 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm26027-201ENSMUST00000122725 268 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm22026-201ENSMUST00000122735 281 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Usp28Q5I043 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.81□□□□□ -1.96
Usp28Q5I043 Spanxn4-201ENSMUST00000172433 424 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm23268-201ENSMUST00000175494 78 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.81□□□□□ -1.96
Usp28Q5I043 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm7909-201ENSMUST00000182688 614 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Mir7658-201ENSMUST00000184043 57 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm18692-201ENSMUST00000193047 511 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm19563-201ENSMUST00000222031 270 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Usp28Q5I043 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Usp28Q5I043 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.81□□□□□ -1.96
Usp28Q5I043 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Usp28Q5I043 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Usp28Q5I043 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
Usp28Q5I043 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Usp28Q5I043 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Usp28Q5I043 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm22072-201ENSMUST00000116850 121 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm11577-201ENSMUST00000118030 737 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm6664-201ENSMUST00000119138 468 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm15466-201ENSMUST00000122299 333 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm25224-201ENSMUST00000158195 68 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm22769-201ENSMUST00000158367 98 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm5277-201ENSMUST00000164923 556 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm43407-201ENSMUST00000199816 317 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm19177-201ENSMUST00000204520 613 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 AC091260.1-201ENSMUST00000216112 229 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm19540-201ENSMUST00000221843 810 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm18026-201ENSMUST00000222789 727 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Usp28Q5I043 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.8□□□□□ -1.96
Usp28Q5I043 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Usp28Q5I043 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Usp28Q5I043 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm14669-201ENSMUST00000118841 250 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm9440-201ENSMUST00000119667 539 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm15452-201ENSMUST00000119877 240 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm16412-201ENSMUST00000121602 273 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm12412-201ENSMUST00000121867 328 ntBASIC2.79□□□□□ -1.96
Usp28Q5I043 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms