Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm24150-201ENSMUST00000082759 104 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm22740-201ENSMUST00000083439 109 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Mir19a-201ENSMUST00000083482 82 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm14172-201ENSMUST00000118255 644 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm14793-201ENSMUST00000118739 311 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm11356-201ENSMUST00000118974 192 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm13873-201ENSMUST00000119208 427 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm13482-201ENSMUST00000119842 254 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm12640-201ENSMUST00000120097 310 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm24720-201ENSMUST00000157518 166 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm23619-201ENSMUST00000178411 94 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm25474-201ENSMUST00000179052 94 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm22047-201ENSMUST00000179176 94 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm37727-201ENSMUST00000191637 819 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm2189-201ENSMUST00000201419 429 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm44181-201ENSMUST00000203106 483 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm45173-201ENSMUST00000206819 305 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 AC152415.1-201ENSMUST00000213320 440 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 AC156790.5-201ENSMUST00000227075 231 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm9765-201ENSMUST00000043170 321 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Gm23503-201ENSMUST00000083903 107 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trim40Q3UWA4 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm25876-201ENSMUST00000104329 119 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm14292-201ENSMUST00000118761 456 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm13356-201ENSMUST00000121678 335 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm23415-201ENSMUST00000175519 83 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Mir8096-201ENSMUST00000184526 127 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm18956-201ENSMUST00000192857 480 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm38044-201ENSMUST00000192964 487 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm45400-201ENSMUST00000211603 653 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 AC153526.1-201ENSMUST00000219750 190 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 AC155929.1-201ENSMUST00000220217 1276 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm46994-201ENSMUST00000221523 219 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm5955-201ENSMUST00000222712 219 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 AC074315.1-201ENSMUST00000228801 214 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.93□□□□□ -1.94
Trim40Q3UWA4 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm13329-201ENSMUST00000117063 265 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm13046-201ENSMUST00000117391 501 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm14751-201ENSMUST00000117693 222 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm26277-201ENSMUST00000157097 152 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm22076-201ENSMUST00000158601 84 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm28283-201ENSMUST00000185509 178 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm19498-201ENSMUST00000191128 331 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm36984-201ENSMUST00000192770 235 ntBASIC2.92□□□□□ -1.94
Trim40Q3UWA4 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms