Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm43142-201ENSMUST00000198670 361 ntBASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 Gm43954-201ENSMUST00000204634 544 ntBASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 Gm18268-201ENSMUST00000208445 943 ntBASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 Gm19709-201ENSMUST00000215403 482 ntBASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 Gm18557-201ENSMUST00000218710 433 ntBASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 Gm25202-201ENSMUST00000082838 191 ntBASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Upf3aQ3ULJ3 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm25529-201ENSMUST00000104850 92 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm15399-201ENSMUST00000118055 724 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm11819-201ENSMUST00000122192 372 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Nron-204ENSMUST00000158971 370 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm35570-201ENSMUST00000198730 681 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm44058-201ENSMUST00000204335 467 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm10088-201ENSMUST00000074116 423 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Upf3aQ3ULJ3 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm24670-201ENSMUST00000104154 132 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm15282-201ENSMUST00000117707 300 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm6574-201ENSMUST00000120037 362 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm14898-201ENSMUST00000120202 645 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm23895-201ENSMUST00000158108 160 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm22664-201ENSMUST00000158719 105 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm43096-201ENSMUST00000196173 421 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Gm6796-201ENSMUST00000211919 243 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Upf3aQ3ULJ3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm25485-201ENSMUST00000104120 132 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm16171-201ENSMUST00000118004 324 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm11943-201ENSMUST00000119473 327 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm13059-201ENSMUST00000119881 398 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm14238-201ENSMUST00000120227 323 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm14363-201ENSMUST00000122304 409 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm14713-201ENSMUST00000122362 686 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm23754-201ENSMUST00000157576 63 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm22330-201ENSMUST00000158068 115 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Mir3075-201ENSMUST00000175340 85 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm43104-201ENSMUST00000197234 311 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Gm43393-201ENSMUST00000200147 194 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Mir127-201ENSMUST00000093568 70 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Upf3aQ3ULJ3 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Upf3aQ3ULJ3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Upf3aQ3ULJ3 Gm6913-201ENSMUST00000100019 348 ntBASIC2.78□□□□□ -1.96
Upf3aQ3ULJ3 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Upf3aQ3ULJ3 Gm13210-201ENSMUST00000121483 273 ntBASIC2.78□□□□□ -1.96
Upf3aQ3ULJ3 Gm15065-201ENSMUST00000121699 273 ntBASIC2.78□□□□□ -1.96
Upf3aQ3ULJ3 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms