Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Mir667-201ENSMUST00000102441 92 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm11219-201ENSMUST00000118565 358 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm12156-201ENSMUST00000119188 554 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm2318-201ENSMUST00000119623 639 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm14877-201ENSMUST00000119803 478 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm2768-201ENSMUST00000121062 250 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm16363-201ENSMUST00000132460 877 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm23668-201ENSMUST00000157465 111 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm26088-201ENSMUST00000157896 131 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm24190-201ENSMUST00000157976 216 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm20415-201ENSMUST00000172877 423 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm7438-201ENSMUST00000177664 639 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm7408-201ENSMUST00000178014 639 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm7386-201ENSMUST00000178020 639 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm3657-201ENSMUST00000178170 639 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm7415-201ENSMUST00000178205 639 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm7398-201ENSMUST00000178589 639 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm7391-201ENSMUST00000178680 639 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm7375-201ENSMUST00000179232 639 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm3681-201ENSMUST00000179940 639 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm8649-201ENSMUST00000181799 233 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm43582-201ENSMUST00000196149 343 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm43407-201ENSMUST00000199816 317 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm43171-201ENSMUST00000199882 291 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm19253-201ENSMUST00000204279 307 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm45316-201ENSMUST00000210128 162 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Gm46194-201ENSMUST00000218136 320 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trafd1Q3UDK1 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
Trafd1Q3UDK1 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
Trafd1Q3UDK1 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm22591-201ENSMUST00000104243 106 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm7071-201ENSMUST00000120458 462 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm23059-201ENSMUST00000158978 107 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm17117-201ENSMUST00000163665 299 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm23648-201ENSMUST00000180301 107 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm27477-201ENSMUST00000184649 143 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm37007-201ENSMUST00000194234 319 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm43043-201ENSMUST00000196579 412 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm43239-201ENSMUST00000200131 201 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm45400-201ENSMUST00000211603 653 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm45439-201ENSMUST00000211723 359 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm31849-201ENSMUST00000220306 375 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm10038-201ENSMUST00000077233 441 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm23506-201ENSMUST00000083077 107 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.9□□□□□ -1.95
Trafd1Q3UDK1 Mir499-201ENSMUST00000102357 79 ntBASIC2.89□□□□□ -1.95
Trafd1Q3UDK1 Gm25213-201ENSMUST00000102388 113 ntBASIC2.89□□□□□ -1.95
Trafd1Q3UDK1 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.89□□□□□ -1.95
Trafd1Q3UDK1 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
Trafd1Q3UDK1 Gm14981-201ENSMUST00000117325 943 ntBASIC2.89□□□□□ -1.95
Trafd1Q3UDK1 Gm13504-201ENSMUST00000117490 316 ntBASIC2.89□□□□□ -1.95
Trafd1Q3UDK1 Gm14566-201ENSMUST00000118915 321 ntBASIC2.89□□□□□ -1.95
Trafd1Q3UDK1 Gm15986-201ENSMUST00000122153 400 ntBASIC2.89□□□□□ -1.95
Trafd1Q3UDK1 Gm23325-201ENSMUST00000157422 129 ntBASIC2.89□□□□□ -1.95
Trafd1Q3UDK1 Gm23380-201ENSMUST00000158448 103 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms