Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.29□□□□□ -1.88
Brf2Q3UAW9 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Brf2Q3UAW9 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm25169-201ENSMUST00000104190 129 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm14768-201ENSMUST00000122126 678 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm23886-201ENSMUST00000122684 313 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm25667-201ENSMUST00000157701 275 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm24532-201ENSMUST00000157951 286 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm23666-201ENSMUST00000158053 116 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm24551-201ENSMUST00000158645 92 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm24925-201ENSMUST00000178157 107 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm38053-201ENSMUST00000193938 160 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm25411-201ENSMUST00000083760 151 ntBASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Brf2Q3UAW9 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.28□□□□□ -1.89
Brf2Q3UAW9 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm25728-201ENSMUST00000104525 159 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm25507-201ENSMUST00000116981 144 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm12335-201ENSMUST00000119738 327 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm15014-201ENSMUST00000120742 258 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm11582-201ENSMUST00000121041 236 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm8880-201ENSMUST00000121800 454 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm14804-201ENSMUST00000122322 508 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm14562-201ENSMUST00000129885 543 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm22793-201ENSMUST00000157227 330 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm22034-201ENSMUST00000157283 134 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm24439-201ENSMUST00000157894 117 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm16289-201ENSMUST00000162079 183 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm11395-201ENSMUST00000181011 499 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm7329-201ENSMUST00000185915 210 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm18403-201ENSMUST00000192907 529 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm42164-201ENSMUST00000198881 379 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm19177-201ENSMUST00000204520 613 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm22974-201ENSMUST00000083301 103 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Brf2Q3UAW9 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Gm15783-201ENSMUST00000117521 633 ntBASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Gm14918-201ENSMUST00000118153 268 ntBASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Gm15026-201ENSMUST00000119219 458 ntBASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Gm13804-201ENSMUST00000119552 172 ntBASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Gm13574-201ENSMUST00000120482 394 ntBASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Gm14766-201ENSMUST00000121689 367 ntBASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Gm22555-201ENSMUST00000157801 62 ntBASIC3.26□□□□□ -1.89
Brf2Q3UAW9 Gm24438-201ENSMUST00000157893 115 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms