Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm13967-201ENSMUST00000120404 380 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm12956-201ENSMUST00000122184 414 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm22345-201ENSMUST00000122644 107 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm24944-201ENSMUST00000158330 128 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm23759-201ENSMUST00000158351 268 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm26404-201ENSMUST00000158498 109 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm6374-201ENSMUST00000159051 788 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm17065-201ENSMUST00000165245 239 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm23638-201ENSMUST00000175073 126 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm23158-201ENSMUST00000175076 126 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm22907-201ENSMUST00000175198 126 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm22625-201ENSMUST00000175382 126 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm22875-201ENSMUST00000175449 126 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm25197-201ENSMUST00000175516 126 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm27857-201ENSMUST00000176930 126 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm26268-201ENSMUST00000177685 126 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm23402-201ENSMUST00000178130 107 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm23681-201ENSMUST00000178821 126 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm26189-201ENSMUST00000179879 107 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm26983-201ENSMUST00000182051 388 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Mir6537-201ENSMUST00000184150 110 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm27940-201ENSMUST00000184449 98 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm28118-201ENSMUST00000185957 294 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm28921-201ENSMUST00000190219 378 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm7837-201ENSMUST00000190873 412 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm43304-201ENSMUST00000196803 326 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm45859-201ENSMUST00000212794 214 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm46998-201ENSMUST00000221444 330 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm23300-201ENSMUST00000082712 125 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Mir132-201ENSMUST00000083603 66 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Mir338-201ENSMUST00000083666 98 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col8a1Q00780 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col8a1Q00780 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col8a1Q00780 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC3.85□□□□□ -1.79
Col8a1Q00780 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col8a1Q00780 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col8a1Q00780 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Col8a1Q00780 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col8a1Q00780 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col8a1Q00780 Mir676-201ENSMUST00000102443 89 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col8a1Q00780 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm12039-201ENSMUST00000118219 180 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm11935-201ENSMUST00000118608 399 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm12721-201ENSMUST00000120621 268 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm12226-201ENSMUST00000144172 876 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm24774-201ENSMUST00000157384 134 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm25572-201ENSMUST00000157527 172 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm23318-201ENSMUST00000158000 108 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm23179-201ENSMUST00000158693 304 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm17072-201ENSMUST00000166673 658 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm17183-201ENSMUST00000171170 493 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm25360-201ENSMUST00000178786 191 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm23816-201ENSMUST00000179617 132 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm29352-201ENSMUST00000188054 544 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm8939-201ENSMUST00000192577 964 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm4248-201ENSMUST00000196905 316 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm43651-201ENSMUST00000199796 439 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm44977-201ENSMUST00000205283 420 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.85□□□□□ -1.79
Col8a1Q00780 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col8a1Q00780 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col8a1Q00780 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col8a1Q00780 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.85□□□□□ -1.79
Col8a1Q00780 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col8a1Q00780 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col8a1Q00780 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm24867-201ENSMUST00000104161 107 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm26367-201ENSMUST00000104165 132 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm14296-202ENSMUST00000108931 750 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm15783-201ENSMUST00000117521 633 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm13876-201ENSMUST00000118451 261 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm14940-201ENSMUST00000119309 495 ntBASIC3.84□□□□□ -1.79
Col8a1Q00780 Gm12118-201ENSMUST00000119766 532 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms